Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03804 and RBAM_023860
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:08
# Commandline: needle
# -asequence pep-align/BSNT_03804___holA.1.9828.seq
# -bsequence pep-align/RBAM_023860___holA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03804___holA-RBAM_023860___holA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03804___holA-RBAM_023860___holA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03804___holA
# 2: RBAM_023860___holA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 347
# Identity: 295/347 (85.0%)
# Similarity: 318/347 (91.6%)
# Gaps: 7/347 ( 2.0%)
# Score: 1504.0
#
#
#=======================================
BSNT_03804___ 1 MVFDVWKSLKKGDVHPVYCLYGKETYLLQETVSRIRQTVVDQETKDFNLS 50
|||||||:||||||..|||||||||||||||||||||.|||:||||||||
RBAM_023860__ 1 MVFDVWKALKKGDVRSVYCLYGKETYLLQETVSRIRQAVVDEETKDFNLS 50
BSNT_03804___ 51 VFDLEEDPLDQAIADAETFPFMGERRLVIVKNPYFLTGEKKKEKIEHNVS 100
||||||||||||:.||||||||||:||||||||.||||||||||||||.:
RBAM_023860__ 51 VFDLEEDPLDQAVTDAETFPFMGEKRLVIVKNPSFLTGEKKKEKIEHNTA 100
BSNT_03804___ 101 ALESYIQSPAPYTVFVLLAPYEKLDERKKLTKALKKHAFMMEAKELNAKE 150
|||:|::.||||||||::|||||||||||||||||:.|.|:|||||||||
RBAM_023860__ 101 ALETYLKEPAPYTVFVIVAPYEKLDERKKLTKALKQKALMIEAKELNAKE 150
BSNT_03804___ 151 TTDFTVNLAKTEQKTIGTEAAEHLVLLVNGHLSSIFQEIQKLCTFIGDRE 200
|||||:||||:|.|.|.||||||||||.|||||||:||||||..:.|||.
RBAM_023860__ 151 TTDFTINLAKSENKMIDTEAAEHLVLLANGHLSSIYQEIQKLSAYTGDRH 200
BSNT_03804___ 201 EITLDDVKMLVARSLEQNIFELINKIVNRKRTESLQIFYDLLKQNEEPIK 250
||||:||:.|||||||||||||||||||||||||||||||||||||||||
RBAM_023860__ 201 EITLEDVRELVARSLEQNIFELINKIVNRKRTESLQIFYDLLKQNEEPIK 250
BSNT_03804___ 251 IMALISNQFRLILQTKYFAEQGYGQKQIASNLKVHPFRVKLAMDQARLFS 300
|||||:||||||:||||||.||||||||||||||||||||||||||||||
RBAM_023860__ 251 IMALIANQFRLIMQTKYFAGQGYGQKQIASNLKVHPFRVKLAMDQARLFS 300
BSNT_03804___ 301 EEELRLIIEQLAVMDYEMKTGKKDKQLLLELFLLQLLKRNEKNDPHY 347
|||||.|||:||||||||||||||||||||||||:||:..
RBAM_023860__ 301 EEELRRIIERLAVMDYEMKTGKKDKQLLLELFLLELLRTE------- 340
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