Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03802 and RBAM_023850

See DNA alignment / Visit BSNT_03802 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:08
# Commandline: needle
#    -asequence pep-align/BSNT_03802___rpsT.1.9828.seq
#    -bsequence pep-align/RBAM_023850___rpsT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03802___rpsT-RBAM_023850___rpsT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03802___rpsT-RBAM_023850___rpsT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03802___rpsT
# 2: RBAM_023850___rpsT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 88
# Identity:      84/88 (95.5%)
# Similarity:    86/88 (97.7%)
# Gaps:           0/88 ( 0.0%)
# Score: 409.0
# 
#
#=======================================

BSNT_03802___      1 MPNIKSAIKRTKTNNERRVHNATIKSAMRTAIKQVEASVANNEADKAKTA     50
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
RBAM_023850__      1 MPNIKSAIKRTKTNNERRAHNATIKSAMRTAIKQVEASVANNEADKAKTA     50

BSNT_03802___     51 LTEAAKRIDKAVKTGLVHKNTAARYKSRLAKKVNGLSA     88
                     |:||||||||||||||||||.||||||||||:||||||
RBAM_023850__     51 LSEAAKRIDKAVKTGLVHKNAAARYKSRLAKQVNGLSA     88


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