Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_03802 and RBAM_023850

See Amino acid alignment / Visit BSNT_03802 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:08
# Commandline: needle
#    -asequence dna-align/BSNT_03802___rpsT.1.9828.seq
#    -bsequence dna-align/RBAM_023850___rpsT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03802___rpsT-RBAM_023850___rpsT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03802___rpsT-RBAM_023850___rpsT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03802___rpsT
# 2: RBAM_023850___rpsT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 267
# Identity:     256/267 (95.9%)
# Similarity:   256/267 (95.9%)
# Gaps:           0/267 ( 0.0%)
# Score: 1236.0
# 
#
#=======================================

BSNT_03802___      1 ATGCCAAACATTAAATCAGCGATTAAACGTACAAAAACAAACAACGAACG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_023850__      1 ATGCCAAACATTAAATCAGCGATTAAACGTACAAAAACAAACAACGAACG     50

BSNT_03802___     51 CCGCGTTCATAACGCGACAATCAAATCTGCTATGCGTACTGCAATCAAAC    100
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
RBAM_023850__     51 CCGCGCTCATAACGCGACAATCAAATCTGCTATGCGTACTGCAATCAAAC    100

BSNT_03802___    101 AAGTTGAAGCTTCTGTTGCCAACAACGAAGCTGACAAAGCGAAAACTGCT    150
                     |||||||||||||||||||.|||||||||||.||.|||||||||||||||
RBAM_023850__    101 AAGTTGAAGCTTCTGTTGCTAACAACGAAGCGGATAAAGCGAAAACTGCT    150

BSNT_03802___    151 CTTACTGAAGCAGCTAAACGTATTGATAAAGCAGTGAAAACAGGTCTTGT    200
                     |||.||||||||||.|||||.|||||||||||||||||||||||||||||
RBAM_023850__    151 CTTTCTGAAGCAGCGAAACGCATTGATAAAGCAGTGAAAACAGGTCTTGT    200

BSNT_03802___    201 ACACAAAAATACCGCAGCTCGATACAAATCAAGACTAGCGAAAAAAGTGA    250
                     ||||||||||.|||||||||||||||||||.|||||.||||||.||||||
RBAM_023850__    201 ACACAAAAATGCCGCAGCTCGATACAAATCTAGACTTGCGAAACAAGTGA    250

BSNT_03802___    251 ACGGACTTTCTGCATAA    267
                     |||||||||||||||||
RBAM_023850__    251 ACGGACTTTCTGCATAA    267


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.