Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03800 and RBAM_023830

See DNA alignment / Visit BSNT_03800 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:07
# Commandline: needle
#    -asequence pep-align/BSNT_03800___spoIIP.1.9828.seq
#    -bsequence pep-align/RBAM_023830___spoIIP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03800___spoIIP-RBAM_023830___spoIIP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03800___spoIIP-RBAM_023830___spoIIP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03800___spoIIP
# 2: RBAM_023830___spoIIP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 401
# Identity:     333/401 (83.0%)
# Similarity:   363/401 (90.5%)
# Gaps:           4/401 ( 1.0%)
# Score: 1700.0
# 
#
#=======================================

BSNT_03800___      1 MRNKRRNRQIVVAVNGGKAVKAIFLFIVSLIVIFVLSGVLTSLRPELRPS     50
                     ||.||||||||||||||.|:|.:|||:.||||||||||||||||||||.|
RBAM_023830__      1 MRKKRRNRQIVVAVNGGNALKGMFLFMTSLIVIFVLSGVLTSLRPELRLS     50

BSNT_03800___     51 SDSFYGIAEELPGDVFAHLLRMENHYFASDLSQTDSSFHLSRLSLKLATS    100
                     |||.:|||.|||||.|||||.||||||||:|.:.| ||.|||||||||||
RBAM_023830__     51 SDSLHGIAGELPGDAFAHLLGMENHYFASELPEKD-SFQLSRLSLKLATS     99

BSNT_03800___    101 INLEDPRSFLGRELPGFAQFDTEILLAGQGTDYTNMPAESPPPSKVMEEE    150
                     ||:||||||||||||||||:||||||||||||||||||||||||||||:|
RBAM_023830__    100 INMEDPRSFLGRELPGFAQYDTEILLAGQGTDYTNMPAESPPPSKVMEKE    149

BSNT_03800___    151 REANLAEIEKQQTQSDNAQKDPPKQTTGDKKVVFIYHTHNTESYLPLLKG    200
                     :|.||||||.:..:.:.|   |||.:||.|||||||||||||||||||||
RBAM_023830__    150 KEVNLAEIENKTKKEETA---PPKHSTGSKKVVFIYHTHNTESYLPLLKG    196

BSNT_03800___    201 ETDPDMARHSKANVTLVGDMFGQALESQGIGATVNKTDIQSKLNKKGLNY    250
                     ||:||.||||||||||||||||:|||:||:||||:|||||::|||.||||
RBAM_023830__    197 ETNPDNARHSKANVTLVGDMFGKALEAQGVGATVDKTDIQARLNKDGLNY    246

BSNT_03800___    251 ARSYDESRPVVKDALASNKNLQYIIDIHRDSRRKKDTTATIKGKSYARVA    300
                     ||||||||||||.|||.||||||.|||||||||||:|||.||||||||||
RBAM_023830__    247 ARSYDESRPVVKSALAKNKNLQYTIDIHRDSRRKKNTTADIKGKSYARVA    296

BSNT_03800___    301 FVVGKKSKNFEENYKIASELHKLMEKKYPGLSTGVFSKGSPGDNGVYNQD    350
                     .||||||.|||||||:||||||||||||||||.||.||||||||||||||
RBAM_023830__    297 IVVGKKSANFEENYKLASELHKLMEKKYPGLSVGVLSKGSPGDNGVYNQD    346

BSNT_03800___    351 LTDRALLLEFGGVDNNLEELQRAANAAADVFSEMYWDAEKVNAASGETKK    400
                     |.||:|||||||||||||||:||::|.||||||:|||||||::.|||.||
RBAM_023830__    347 LNDRSLLLEFGGVDNNLEELRRASDAVADVFSELYWDAEKVSSQSGEKKK    396

BSNT_03800___    401 Q    401
                     |
RBAM_023830__    397 Q    397


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