Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03800 and RBAM_023830
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:07
# Commandline: needle
# -asequence pep-align/BSNT_03800___spoIIP.1.9828.seq
# -bsequence pep-align/RBAM_023830___spoIIP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03800___spoIIP-RBAM_023830___spoIIP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03800___spoIIP-RBAM_023830___spoIIP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03800___spoIIP
# 2: RBAM_023830___spoIIP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 401
# Identity: 333/401 (83.0%)
# Similarity: 363/401 (90.5%)
# Gaps: 4/401 ( 1.0%)
# Score: 1700.0
#
#
#=======================================
BSNT_03800___ 1 MRNKRRNRQIVVAVNGGKAVKAIFLFIVSLIVIFVLSGVLTSLRPELRPS 50
||.||||||||||||||.|:|.:|||:.||||||||||||||||||||.|
RBAM_023830__ 1 MRKKRRNRQIVVAVNGGNALKGMFLFMTSLIVIFVLSGVLTSLRPELRLS 50
BSNT_03800___ 51 SDSFYGIAEELPGDVFAHLLRMENHYFASDLSQTDSSFHLSRLSLKLATS 100
|||.:|||.|||||.|||||.||||||||:|.:.| ||.|||||||||||
RBAM_023830__ 51 SDSLHGIAGELPGDAFAHLLGMENHYFASELPEKD-SFQLSRLSLKLATS 99
BSNT_03800___ 101 INLEDPRSFLGRELPGFAQFDTEILLAGQGTDYTNMPAESPPPSKVMEEE 150
||:||||||||||||||||:||||||||||||||||||||||||||||:|
RBAM_023830__ 100 INMEDPRSFLGRELPGFAQYDTEILLAGQGTDYTNMPAESPPPSKVMEKE 149
BSNT_03800___ 151 REANLAEIEKQQTQSDNAQKDPPKQTTGDKKVVFIYHTHNTESYLPLLKG 200
:|.||||||.:..:.:.| |||.:||.|||||||||||||||||||||
RBAM_023830__ 150 KEVNLAEIENKTKKEETA---PPKHSTGSKKVVFIYHTHNTESYLPLLKG 196
BSNT_03800___ 201 ETDPDMARHSKANVTLVGDMFGQALESQGIGATVNKTDIQSKLNKKGLNY 250
||:||.||||||||||||||||:|||:||:||||:|||||::|||.||||
RBAM_023830__ 197 ETNPDNARHSKANVTLVGDMFGKALEAQGVGATVDKTDIQARLNKDGLNY 246
BSNT_03800___ 251 ARSYDESRPVVKDALASNKNLQYIIDIHRDSRRKKDTTATIKGKSYARVA 300
||||||||||||.|||.||||||.|||||||||||:|||.||||||||||
RBAM_023830__ 247 ARSYDESRPVVKSALAKNKNLQYTIDIHRDSRRKKNTTADIKGKSYARVA 296
BSNT_03800___ 301 FVVGKKSKNFEENYKIASELHKLMEKKYPGLSTGVFSKGSPGDNGVYNQD 350
.||||||.|||||||:||||||||||||||||.||.||||||||||||||
RBAM_023830__ 297 IVVGKKSANFEENYKLASELHKLMEKKYPGLSVGVLSKGSPGDNGVYNQD 346
BSNT_03800___ 351 LTDRALLLEFGGVDNNLEELQRAANAAADVFSEMYWDAEKVNAASGETKK 400
|.||:|||||||||||||||:||::|.||||||:|||||||::.|||.||
RBAM_023830__ 347 LNDRSLLLEFGGVDNNLEELRRASDAVADVFSELYWDAEKVSSQSGEKKK 396
BSNT_03800___ 401 Q 401
|
RBAM_023830__ 397 Q 397
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