Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03800 and RBAM_023830
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:07
# Commandline: needle
# -asequence dna-align/BSNT_03800___spoIIP.1.9828.seq
# -bsequence dna-align/RBAM_023830___spoIIP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03800___spoIIP-RBAM_023830___spoIIP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03800___spoIIP-RBAM_023830___spoIIP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03800___spoIIP
# 2: RBAM_023830___spoIIP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1212
# Identity: 929/1212 (76.7%)
# Similarity: 929/1212 (76.7%)
# Gaps: 24/1212 ( 2.0%)
# Score: 3464.0
#
#
#=======================================
BSNT_03800___ 1 ATGAGAAATAAACGCAGAAACAGACAGATTGTTGTTGCGGTAAATGGAGG 50
||||||||.||||||||||||.|.||.|||||.|||||.|||||.||.||
RBAM_023830__ 1 ATGAGAAAAAAACGCAGAAACCGTCAAATTGTCGTTGCAGTAAACGGTGG 50
BSNT_03800___ 51 GAAAGCGGTAAAAGCCATCTTTCTATTTATCGTAAGCCTTATCGTGATTT 100
.||.|||.|.||.|.|||.|||.|.|||||...||||||||||||.||||
RBAM_023830__ 51 AAATGCGCTCAAGGGCATGTTTTTGTTTATGACAAGCCTTATCGTTATTT 100
BSNT_03800___ 101 TTGTTCTATCCGGTGTGCTGACGTCTCTCCGGCCGGAACTTAGGCCGTCG 150
|.||..||||.||||||||.||.||.||.||.||.|||||.||||..||.
RBAM_023830__ 101 TCGTATTATCGGGTGTGCTCACATCGCTTCGCCCTGAACTGAGGCTTTCT 150
BSNT_03800___ 151 TCTGACTCTTTTTATGGGATTGCTGAAGAATTGCCGGGTGACGTATTTGC 200
||.||.|||.||.|.||.|||||.|.||||.|.||.|||||||..|||||
RBAM_023830__ 151 TCGGATTCTCTTCACGGAATTGCCGGAGAACTTCCAGGTGACGCGTTTGC 200
BSNT_03800___ 201 ACATTTGCTGCGG-ATGGAAAACCATTATTTCGCTTCTGACCTCTCTCAA 249
|||..|.|| ||| ||||||||.|||||||||||.||.||.||..||.||
RBAM_023830__ 201 ACACCTCCT-CGGCATGGAAAATCATTATTTCGCCTCAGAGCTTCCTGAA 249
BSNT_03800___ 250 ACCGACAGCTCATTTCATCTTTCTCGTCTTTCTTTAAAGCTGGCGACGAG 299
|..|| |||.|||||.||.||.||.|||||.|||||.||||||||.||
RBAM_023830__ 250 AAAGA---CTCTTTTCAGCTGTCCCGGCTTTCCTTAAAACTGGCGACAAG 296
BSNT_03800___ 300 CATTAACCTCGAAGATCCGCGGAGCTTTCTCGGTCGGGAGCTGCCGGGGT 349
||||||..|.|||||.||||||||.|||.|.||.||.|||||||||||.|
RBAM_023830__ 297 CATTAATATGGAAGACCCGCGGAGTTTTTTGGGACGTGAGCTGCCGGGAT 346
BSNT_03800___ 350 TTGCACAATTTGATACCGAGATTTTGTTAGCTGGACAAGGGACGGATTAT 399
||||.||||..|||||.|||||..|..|.||.||.||.||||||||||||
RBAM_023830__ 347 TTGCCCAATACGATACGGAGATCCTTCTGGCGGGGCAGGGGACGGATTAT 396
BSNT_03800___ 400 ACGAATATGCCTGCGGAATCGCCGCCGCCGTCTAAGGTGATGGAGGAAGA 449
|||||||||||.||.|||||.|||||||||||.|||||||||||..||||
RBAM_023830__ 397 ACGAATATGCCGGCTGAATCTCCGCCGCCGTCAAAGGTGATGGAAAAAGA 446
BSNT_03800___ 450 AAGAGAAGCGAATTTGGCAGAGATTGAAAAACAGCAAACGCAATCAGATA 499
||.|||||.|||..|||||||.||.| |||||| |||||.|| |
RBAM_023830__ 447 AAAAGAAGTGAACCTGGCAGAAATCG-AAAACA--AAACGAAA------A 487
BSNT_03800___ 500 ATGCACAAAAAGATCCGCCCAAACAAACAACAGGTGATAAAAAGGTCGTG 549
|.|.|.|||..|..|||||.|||||..|||||||....|||||.|||||.
RBAM_023830__ 488 AAGAAGAAACGGCGCCGCCAAAACATTCAACAGGCAGCAAAAAAGTCGTT 537
BSNT_03800___ 550 TTTATCTATCACACGCACAATACCGAATCATATCTCCCTCTATTAAAAGG 599
|||||.||.|||||.||.|||||||||||.|||||.|||||.|||||.||
RBAM_023830__ 538 TTTATTTACCACACTCATAATACCGAATCCTATCTTCCTCTGTTAAAGGG 587
BSNT_03800___ 600 CGAGACCGATCCTGACATGGCGCGCCATTCTAAAGCCAACGTCACGCTTG 649
.||.||..||||.||.|..||.||||||||.||.|||||.|||||.||||
RBAM_023830__ 588 GGAAACAAATCCGGATAACGCCCGCCATTCGAAGGCCAATGTCACACTTG 637
BSNT_03800___ 650 TAGGAGATATGTTCGGACAAGCGCTTGAATCCCAGGGAATCGGAGCCACA 699
|.|||||||||||||||.|||||||||||.|.||.||..|.|||||.||.
RBAM_023830__ 638 TCGGAGATATGTTCGGAAAAGCGCTTGAAGCGCAAGGTGTAGGAGCGACC 687
BSNT_03800___ 700 GTGAATAAAACCGATATACAGTCAAAATTAAATAAAAAAGGCCTAAACTA 749
||..||||||||||.||.|||.|.....|.||.|||.|.|||.||||.||
RBAM_023830__ 688 GTAGATAAAACCGACATTCAGGCCCGCCTGAACAAAGACGGCTTAAATTA 737
BSNT_03800___ 750 TGCCAGGTCCTATGATGAATCAAGGCCGGTTGTGAAAGACGCCCTCGCTT 799
|||..|...|||.||.||||||||||||||.||.|||..|||.|||||..
RBAM_023830__ 738 TGCGCGAAGCTACGACGAATCAAGGCCGGTCGTAAAAAGCGCGCTCGCCA 787
BSNT_03800___ 800 CAAACAAAAATCTGCAATATATCATTGACATCCACAGAGACTCACGGCGC 849
.|||.|||||.||||||||||.|||.|||||.|||.|.||.||.||.|||
RBAM_023830__ 788 AAAATAAAAACCTGCAATATACCATAGACATTCACCGGGATTCCCGCCGC 837
BSNT_03800___ 850 A--AAAAAGAC-ACAACCGCAACGATTAAAGGAAAAAGCTATGCCAGGGT 896
| |||||.|| |||.||| || ||.||||||||||||||||||||.||
RBAM_023830__ 838 AAGAAAAATACGACAGCCG--AC-ATCAAAGGAAAAAGCTATGCCAGAGT 884
BSNT_03800___ 897 AGCCTTTGTCGTCGGGAAAAAAAGCAAAAACTTCGAAGAAAACTATAAAA 946
.|||.|.||||||||.|||||||||...||.||.|||||||||||||||.
RBAM_023830__ 885 CGCCATCGTCGTCGGCAAAAAAAGCGCTAATTTTGAAGAAAACTATAAAC 934
BSNT_03800___ 947 TTGCGAGTGAGCTTCATAAACTGATGGAGAAAAAATACCCCGGACTT-AG 995
|.||.|||||.||||||||.||.|||||||||||||||||||| ||| ||
RBAM_023830__ 935 TCGCAAGTGAACTTCATAAGCTCATGGAGAAAAAATACCCCGG-CTTAAG 983
BSNT_03800___ 996 CACAGGTGTCTTTTCCAAAGGCTCGCCAGGCGATAATGGTGTTTACAATC 1045
|...|||||.||.||.||||||||.||.||.||||||||.||.|||||.|
RBAM_023830__ 984 CGTCGGTGTTTTATCAAAAGGCTCTCCGGGAGATAATGGAGTATACAACC 1033
BSNT_03800___ 1046 AGGATTTAACCGATAGAGCGCTTTTGCTCGAGTTTGGCGGAGTAGATAAT 1095
|||||||||.|||..|..|||||.||||.||.||.||.||.||.|||||.
RBAM_023830__ 1034 AGGATTTAAACGACCGGTCGCTTCTGCTGGAATTCGGGGGCGTGGATAAC 1083
BSNT_03800___ 1096 AATCTCGAAGAGCTGCAGCGTGCGGCTAACGCGGCCGCGGACGTATTCAG 1145
|||||.|||||.|||..||||||..|..|.||.|..||.||.||.|||||
RBAM_023830__ 1084 AATCTTGAAGAACTGAGGCGTGCATCAGATGCCGTGGCCGATGTGTTCAG 1133
BSNT_03800___ 1146 CGAAATGTACTGGGATGCTGAAAAGGTCAACGCAGCGAGC-GGGGAGACG 1194
||||.|||||||||||||.||||||||||.|.| ||.|.| ||.||||.|
RBAM_023830__ 1134 CGAACTGTACTGGGATGCAGAAAAGGTCAGCTC-GCAATCAGGAGAGAAG 1182
BSNT_03800___ 1195 AAAAAACAATAA 1206
|||||||||||.
RBAM_023830__ 1183 AAAAAACAATAG 1194
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