Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03799 and RBAM_023820

See DNA alignment / Visit BSNT_03799 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:07
# Commandline: needle
#    -asequence pep-align/BSNT_03799___yqxA.1.9828.seq
#    -bsequence pep-align/RBAM_023820___yqxA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03799___yqxA-RBAM_023820___yqxA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03799___yqxA-RBAM_023820___yqxA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03799___yqxA
# 2: RBAM_023820___yqxA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 112
# Identity:      79/112 (70.5%)
# Similarity:    96/112 (85.7%)
# Gaps:           0/112 ( 0.0%)
# Score: 419.0
# 
#
#=======================================

BSNT_03799___      1 MIAYFGKYLLLVTIMFLGVLFGMQQANNGMLSMKGYHDPSLRGAFTLTDG     50
                     ||.:.||.||:..:||.||||||||||:|||.||||.||||:|||||..|
RBAM_023820__      1 MIRFTGKCLLIAIVMFFGVLFGMQQANSGMLDMKGYKDPSLKGAFTLGGG     50

BSNT_03799___     51 KDNEKEASILGETVTAKDLEEKQKELEKVETFNMFSKAGQALSNTVTNTA    100
                     :..||||||||:||||||||||||:||:.||||:|||||:.||||||::|
RBAM_023820__     51 EGQEKEASILGQTVTAKDLEEKQKQLEQAETFNLFSKAGETLSNTVTDSA    100

BSNT_03799___    101 QSMYEWIRDMNQ    112
                     |:||||:..:|:
RBAM_023820__    101 QAMYEWVSKLNR    112


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