Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03793 and RBAM_023780
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:07
# Commandline: needle
# -asequence pep-align/BSNT_03793.1.9828.seq
# -bsequence pep-align/RBAM_023780___grpE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03793-RBAM_023780___grpE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03793-RBAM_023780___grpE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03793
# 2: RBAM_023780___grpE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 191
# Identity: 99/191 (51.8%)
# Similarity: 112/191 (58.6%)
# Gaps: 77/191 (40.3%)
# Score: 514.0
#
#
#=======================================
BSNT_03793 0 -------------------------------------------------- 0
RBAM_023780__ 1 MSEEKQTAEQVEAAEQEEVTEQAEQAASQEQHEETAGQEEALQHQIDELQ 50
BSNT_03793 1 ---------------------------MEASQKYRSQNIVTDLLPALDSF 23
|||:|||||||:||::|||||:|
RBAM_023780__ 51 GLLDEKENKLLRVQADFENYKRRSRLEMEAAQKYRSQNVVTEILPALDNF 100
BSNT_03793 24 ERALQVEADNEQTKSLLQGMEMVHRQLVEALKKEGVEAIEAVGQEFDPNL 73
||||||||::|||||||||||||.|||::||:||||||||||||||||||
RBAM_023780__ 101 ERALQVEAESEQTKSLLQGMEMVRRQLMDALEKEGVEAIEAVGQEFDPNL 150
BSNT_03793 74 HQAVMQAEDENYGSNIVVEEMQKGYKLKDRVIRPSMVKVNQ 114
||||||.||||:|||||:||:||||||||||||||||||||
RBAM_023780__ 151 HQAVMQVEDENFGSNIVIEELQKGYKLKDRVIRPSMVKVNQ 191
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