Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03793 and RBAM_023780
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:07
# Commandline: needle
# -asequence dna-align/BSNT_03793.1.9828.seq
# -bsequence dna-align/RBAM_023780___grpE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03793-RBAM_023780___grpE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03793-RBAM_023780___grpE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03793
# 2: RBAM_023780___grpE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 577
# Identity: 285/577 (49.4%)
# Similarity: 285/577 (49.4%)
# Gaps: 233/577 (40.4%)
# Score: 1169.0
#
#
#=======================================
BSNT_03793 0 -------------------------------------------------- 0
RBAM_023780__ 1 ATGTCAGAAGAAAAACAAACCGCAGAACAGGTTGAAGCAGCAGAACAAGA 50
BSNT_03793 0 -------------------------------------------------- 0
RBAM_023780__ 51 AGAAGTGACAGAACAGGCAGAACAAGCCGCTTCACAAGAGCAGCATGAAG 100
BSNT_03793 0 -------------------------------------------------- 0
RBAM_023780__ 101 AAACGGCAGGTCAGGAAGAAGCCCTTCAGCACCAAATTGATGAATTGCAG 150
BSNT_03793 0 -------------------------------------------------- 0
RBAM_023780__ 151 GGTTTGCTTGATGAAAAAGAAAACAAGCTTTTGCGTGTTCAAGCAGACTT 200
BSNT_03793 1 -------------------------------ATGGAAGCGTCCCAAAAAT 19
||||||||..|.||.||||
RBAM_023780__ 201 TGAAAACTATAAACGACGCAGCCGCCTTGAAATGGAAGCTGCTCAGAAAT 250
BSNT_03793 20 ACCGTTCTCAAAATATCGTGACTGATTTGCTGCCGGCTCTTGATAGCTTT 69
|||||||||||||..||||.||.||..|.||.||||||||.||.|.||||
RBAM_023780__ 251 ACCGTTCTCAAAACGTCGTAACGGAAATCCTTCCGGCTCTCGACAACTTT 300
BSNT_03793 70 GAACGAGCGCTTCAGGTTGAAGCCGACAATGAACAGACGAAAAGTTTGCT 119
|||||.|||.|.|||||.|||||.||.|..||.|||||.|||||.|||||
RBAM_023780__ 301 GAACGGGCGTTACAGGTAGAAGCTGAAAGCGAGCAGACAAAAAGCTTGCT 350
BSNT_03793 120 CCAGGGAATGGAAATGGTCCACCGTCAGCTCGTAGAAGC-CTTGAAAAAA 168
.||.||.|||||||||||||.|||.|||||..|.||.|| |||| |||||
RBAM_023780__ 351 GCAAGGTATGGAAATGGTCCGCCGCCAGCTGATGGACGCACTTG-AAAAA 399
BSNT_03793 169 GAAGGCGTCGAAGCCATCGAAGCTGTAGGGCAGGAATTTGATCCTAATCT 218
||||||||.|||||||||||||||||.||.||||||||||||||.||.||
RBAM_023780__ 400 GAAGGCGTTGAAGCCATCGAAGCTGTCGGTCAGGAATTTGATCCGAACCT 449
BSNT_03793 219 GCACCAAGCTGTTATGCAGGCTGAAGACGAAAACTACGGCTCCAACATTG 268
.||||||||.||.|||||||..|||||.|||||||.||||..|||.||||
RBAM_023780__ 450 TCACCAAGCCGTCATGCAGGTGGAAGATGAAAACTTCGGCAGCAATATTG 499
BSNT_03793 269 TTGTTGAGGAAATGCAAAAAGGCTATAAGCTGAAGGATCGCGTCATTCGC 318
||.|.||.|||.|||||||||||||.||.||||||||||||||||||||.
RBAM_023780__ 500 TTATCGAAGAACTGCAAAAAGGCTACAAACTGAAGGATCGCGTCATTCGT 549
BSNT_03793 319 CCTTCCATGGTCAAAGTGAATCAATAA 345
|||||.|||||.|||||||||||||||
RBAM_023780__ 550 CCTTCAATGGTAAAAGTGAATCAATAA 576
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