Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03786 and RBAM_023720

See DNA alignment / Visit BSNT_03786 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:06
# Commandline: needle
#    -asequence pep-align/BSNT_03786___yqeW.1.9828.seq
#    -bsequence pep-align/RBAM_023720___yqeW.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03786___yqeW-RBAM_023720___yqeW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03786___yqeW-RBAM_023720___yqeW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03786___yqeW
# 2: RBAM_023720___yqeW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 311
# Identity:     246/311 (79.1%)
# Similarity:   275/311 (88.4%)
# Gaps:           4/311 ( 1.3%)
# Score: 1244.0
# 
#
#=======================================

BSNT_03786___      1 ---MLILISFTALILFFLTGMNMLRKGLISMAYSKIEDRLLLFTDHPLKA     47
                        ::|||.||||||.||.||::||:|||::.|||||..|||||||||||
RBAM_023720__      1 MFHLMILILFTALILVFLLGMSLLRQGLIALTYSKIEKSLLLFTDHPLKA     50

BSNT_03786___     48 FLISIVFTGILQSSSAFMVIVIGFVSAGVLSFKRTIPMILGTNVGSTFTT     97
                     |||||||||.||||||||||||||||||.|||||||||||||||||||||
RBAM_023720__     51 FLISIVFTGFLQSSSAFMVIVIGFVSAGALSFKRTIPMILGTNVGSTFTT    100

BSNT_03786___     98 EFIAIKMDILIWVLLIGGLLFFLTGRYPLKQLGTSFLGLGIIFFCISGFS    147
                     ||:|||||:|||||.||||:|.|..:||.:|:|.||||||||||||:.||
RBAM_023720__    101 EFLAIKMDVLIWVLFIGGLVFILLRKYPFRQIGISFLGLGIIFFCITCFS    150

BSNT_03786___    148 HLAGPLTKLKTGADVLYHVNDSNWSALLIGMVLTAIIHSSSVCIGILMSF    197
                     .||.|||::|.||:||.|||||:||||.|||:||||||||||||||||||
RBAM_023720__    151 RLAVPLTEMKAGAEVLRHVNDSSWSALFIGMILTAIIHSSSVCIGILMSF    200

BSNT_03786___    198 MNEGIIGLTQAMSVVLGSNIGTCITAVMAAVSGGYAAKQTAYAHVVFNVL    247
                     ||||:||:.||:|||||||||||:|||||||||||||:|||.||||||:|
RBAM_023720__    201 MNEGVIGIEQAVSVVLGSNIGTCVTAVMAAVSGGYAARQTAGAHVVFNIL    250

BSNT_03786___    248 GVALVLPFLTAATGFVEQLSPDPAQRIAHFSLLFNVVTALLFLPLTNLFY    297
                     ||.||.|||:|:.||.|:||.||||.||||||||||||||||||.|:|||
RBAM_023720__    251 GVLLVFPFLSASAGFTERLSDDPAQMIAHFSLLFNVVTALLFLPFTHLFY    300

BSNT_03786___    298 RLIHLLIPAK-    307
                     |||..|||.| 
RBAM_023720__    301 RLIDRLIPPKP    311


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