Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03784 and RBAM_023700

See DNA alignment / Visit BSNT_03784 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:05
# Commandline: needle
#    -asequence pep-align/BSNT_03784___yqeY.1.9828.seq
#    -bsequence pep-align/RBAM_023700___yqeY.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03784___yqeY-RBAM_023700___yqeY.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03784___yqeY-RBAM_023700___yqeY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03784___yqeY
# 2: RBAM_023700___yqeY
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 148
# Identity:     140/148 (94.6%)
# Similarity:   146/148 (98.6%)
# Gaps:           0/148 ( 0.0%)
# Score: 677.0
# 
#
#=======================================

BSNT_03784___      1 MSLLERLNQDMKLYMKNREKDKLTVVRMVKASLQNEAIKLKKDSLTEDEE     50
                     ||||||||||||||||:|||||||||||||||||||||||||||||||||
RBAM_023700__      1 MSLLERLNQDMKLYMKSREKDKLTVVRMVKASLQNEAIKLKKDSLTEDEE     50

BSNT_03784___     51 LTVLSRELKQRKDSLQEFSNANRLDLVDKVQKELDILEVYLPEQLSEEEL    100
                     |||||||||||||||.||||||||||||||||||||||||||:|||||||
RBAM_023700__     51 LTVLSRELKQRKDSLHEFSNANRLDLVDKVQKELDILEVYLPKQLSEEEL    100

BSNT_03784___    101 RTIVNDTIAEVGASSKADMGKVMGAIMPKVKGKADGSLINKLVSSQLS    148
                     :||||:|||||||||||||||||.|||||||||||||:||:|||||||
RBAM_023700__    101 QTIVNETIAEVGASSKADMGKVMSAIMPKVKGKADGSVINRLVSSQLS    148


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.