Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03784 and RBAM_023700

See Amino acid alignment / Visit BSNT_03784 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:06
# Commandline: needle
#    -asequence dna-align/BSNT_03784___yqeY.1.9828.seq
#    -bsequence dna-align/RBAM_023700___yqeY.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03784___yqeY-RBAM_023700___yqeY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03784___yqeY-RBAM_023700___yqeY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03784___yqeY
# 2: RBAM_023700___yqeY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 447
# Identity:     416/447 (93.1%)
# Similarity:   416/447 (93.1%)
# Gaps:           0/447 ( 0.0%)
# Score: 1956.0
# 
#
#=======================================

BSNT_03784___      1 ATGAGTCTTCTTGAGCGTCTCAACCAGGATATGAAGCTGTATATGAAAAA     50
                     |||||||||||||||||.||.|||||.||||||||||||||||||||||.
RBAM_023700__      1 ATGAGTCTTCTTGAGCGACTTAACCAAGATATGAAGCTGTATATGAAAAG     50

BSNT_03784___     51 CCGTGAGAAAGACAAACTGACTGTCGTTCGAATGGTTAAGGCTTCACTTC    100
                     ||||||||||||||||||||||||||||||||||||.||.||||||||||
RBAM_023700__     51 CCGTGAGAAAGACAAACTGACTGTCGTTCGAATGGTGAAAGCTTCACTTC    100

BSNT_03784___    101 AAAATGAAGCAATTAAGCTTAAGAAAGACAGTTTGACCGAGGATGAGGAA    150
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
RBAM_023700__    101 AAAACGAAGCAATTAAGCTTAAGAAAGACAGTTTGACCGAGGATGAGGAA    150

BSNT_03784___    151 CTCACTGTCCTTTCTCGTGAACTTAAGCAACGTAAAGACTCCCTCCAGGA    200
                     ||.||||||||.|||||||||||||||||||||||||||||||||||.||
RBAM_023700__    151 CTTACTGTCCTATCTCGTGAACTTAAGCAACGTAAAGACTCCCTCCATGA    200

BSNT_03784___    201 ATTTTCAAACGCTAATCGTTTAGATTTAGTAGATAAAGTTCAAAAAGAGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_023700__    201 ATTTTCAAACGCTAATCGTTTAGATTTAGTAGATAAAGTTCAAAAAGAGC    250

BSNT_03784___    251 TGGACATTTTAGAAGTTTATTTACCTGAGCAGCTGTCAGAAGAAGAGCTG    300
                     |||||||||||||||||||||||||..|||||||.||.||||||||||||
RBAM_023700__    251 TGGACATTTTAGAAGTTTATTTACCGAAGCAGCTTTCTGAAGAAGAGCTG    300

BSNT_03784___    301 CGTACAATCGTAAATGATACCATCGCGGAGGTCGGTGCGAGCTCAAAAGC    350
                     |..||||||||||||||.||||||||.||.||||||||||||||.|||||
RBAM_023700__    301 CAGACAATCGTAAATGAAACCATCGCTGAAGTCGGTGCGAGCTCCAAAGC    350

BSNT_03784___    351 GGACATGGGCAAAGTGATGGGGGCAATTATGCCTAAAGTAAAAGGTAAAG    400
                     |||||||||||||||||||.|.||.|||||||||||||||||||||||||
RBAM_023700__    351 GGACATGGGCAAAGTGATGAGTGCTATTATGCCTAAAGTAAAAGGTAAAG    400

BSNT_03784___    401 CTGACGGAAGTTTAATTAATAAACTTGTGAGCAGTCAACTGTCTTAA    447
                     |||||||.||..|||||||.|.||||||.|||||||||.|.||||||
RBAM_023700__    401 CTGACGGCAGCGTAATTAACAGACTTGTCAGCAGTCAATTATCTTAA    447


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