Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03782 and RBAM_023680
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:05
# Commandline: needle
# -asequence pep-align/BSNT_03782___yqfA.1.9828.seq
# -bsequence pep-align/RBAM_023680___yqfA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03782___yqfA-RBAM_023680___yqfA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03782___yqfA-RBAM_023680___yqfA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03782___yqfA
# 2: RBAM_023680___yqfA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 331
# Identity: 308/331 (93.1%)
# Similarity: 320/331 (96.7%)
# Gaps: 1/331 ( 0.3%)
# Score: 1509.0
#
#
#=======================================
BSNT_03782___ 1 MDPSTLMILAIVAVAIIVLAVFFTFVPVMLWISALAAGVKISIFTLVGMR 50
|:.|:|.|||:||.||||||:||||||||||||||||||:||||||||||
RBAM_023680__ 1 MELSSLAILALVAAAIIVLAIFFTFVPVMLWISALAAGVRISIFTLVGMR 50
BSNT_03782___ 51 LRRVIPNRVVNPLIKAHKAGLNVGTNQLESHYLAGGNVDRVVNALIAAQR 100
||||||:||||||||||||||:..||||||||||||||||||||||||||
RBAM_023680__ 51 LRRVIPSRVVNPLIKAHKAGLSATTNQLESHYLAGGNVDRVVNALIAAQR 100
BSNT_03782___ 101 ANIELTFERCAAIDLAGRDVLEAVQMSVNPKVIETPFIAGVAMDGIEVKA 150
|||||:||||||||||||||||||||||||||||||||||||||||||||
RBAM_023680__ 101 ANIELSFERCAAIDLAGRDVLEAVQMSVNPKVIETPFIAGVAMDGIEVKA 150
BSNT_03782___ 151 KARITVRANIERLVGGAGEETIVARVGEGIVSTIGSSDNHKKVLENPDMI 200
|||||||||||||||||||||:|||||||||||||||.||||||||||||
RBAM_023680__ 151 KARITVRANIERLVGGAGEETVVARVGEGIVSTIGSSHNHKKVLENPDMI 200
BSNT_03782___ 201 SQTVLGKGLDSGTAFEILSIDIADVDIGKNIGAILQTDQAEADKNIAQAK 250
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_023680__ 201 SQTVLGKGLDSGTAFEILSIDIADVDIGKNIGAILQTDQAEADKNIAQAK 250
BSNT_03782___ 251 AEERRAMAVAQEQEMRARVEEMRAKVVEAEAEVPLAMAEALREGNIGVMD 300
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_023680__ 251 AEERRAMAVAQEQEMRARVEEMRAKVVEAEAEVPLAMAEALREGNIGVMD 300
BSNT_03782___ 301 YMNIKNIDADTEMRDSFGKLTKDPSDEDRKS 331
|||||||||||:||||.||||.|..|||::
RBAM_023680__ 301 YMNIKNIDADTDMRDSIGKLTNDQQDEDQQ- 330
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