Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03782 and RBAM_023680
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:05
# Commandline: needle
# -asequence dna-align/BSNT_03782___yqfA.1.9828.seq
# -bsequence dna-align/RBAM_023680___yqfA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03782___yqfA-RBAM_023680___yqfA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03782___yqfA-RBAM_023680___yqfA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03782___yqfA
# 2: RBAM_023680___yqfA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1000
# Identity: 792/1000 (79.2%)
# Similarity: 792/1000 (79.2%)
# Gaps: 11/1000 ( 1.1%)
# Score: 3138.0
#
#
#=======================================
BSNT_03782___ 1 ATGGATCCGTCAACACTTATGATTCTGGCAATTGTCGCAGTAGCGATCAT 50
|||||.|.|||||...|...||||.|.|||.|.||.||.|..||.||.||
RBAM_023680__ 1 ATGGAACTGTCAAGTTTGGCGATTTTAGCATTAGTTGCTGCTGCCATTAT 50
BSNT_03782___ 51 TGTTTTGGCAGTATTTTTTACATTTGTGCCTGTAATGCTTTGGATTTCAG 100
|||.||.||..||||.||.||.|||||.||.||.|||||.||||||||.|
RBAM_023680__ 51 TGTGTTAGCCATATTCTTCACCTTTGTACCGGTGATGCTATGGATTTCGG 100
BSNT_03782___ 101 CTTTGGCAGCCGGAGTGAAAATCAGCATTTTCACTCTAGTTGGGATGAGG 150
|..|.||.||.|||||.|.||||||||||||||||.|.||.|||||||||
RBAM_023680__ 101 CGCTTGCGGCAGGAGTCAGAATCAGCATTTTCACTTTGGTCGGGATGAGG 150
BSNT_03782___ 151 CTTCGCCGTGTCATTCCGAATCGGGTTGTTAACCCGCTGATTAAAGCCCA 200
||.||.||.|||||.||.|..||.|||||.||.|||.|.||||||||.||
RBAM_023680__ 151 CTGCGGCGCGTCATACCAAGCCGCGTTGTCAATCCGTTAATTAAAGCGCA 200
BSNT_03782___ 201 TAAAGCGGGACTTAATGTTGG----AACAAACCAGCTTGAAAGCCACTAC 246
.|||||.||.| |||..| ||||||.|||||.||||||||.||.
RBAM_023680__ 201 CAAAGCCGGCC----TGTCCGCAACAACAAATCAGCTCGAAAGCCATTAT 246
BSNT_03782___ 247 CTGGCTGGAGGTAATGTTGACAGAGTCGTCAACGCGCTTATCGCCGCTCA 296
|||||.|||||||||||.|||||.||.|||||.||.||.||.||.||.||
RBAM_023680__ 247 CTGGCCGGAGGTAATGTCGACAGGGTGGTCAATGCCCTGATTGCGGCACA 296
BSNT_03782___ 297 GCGAGCTAACATTGAACTCACATTCGAGCGCTGTGCTGCCATTGATCTTG 346
|||.||.||.|||||.||..||||.||.|||||.||.||||||||.||.|
RBAM_023680__ 297 GCGCGCCAATATTGAGCTGTCATTTGAACGCTGCGCAGCCATTGACCTGG 346
BSNT_03782___ 347 CAGGCCGGGACGTGTTGGAAGCTGTTCAAATGAGCGTTAATCCTAAGGTG 396
|.||.||.|||||.||||||||.||.||.||||||||||||||.|||||.
RBAM_023680__ 347 CCGGGCGTGACGTATTGGAAGCCGTACAGATGAGCGTTAATCCGAAGGTC 396
BSNT_03782___ 397 ATTGAAACACCGTTCATTGCCGGTGTTGCAATGGACGGGATTGAAGTGAA 446
||||||||||||||.||.||.|||||.||.||||||||.||||||||.||
RBAM_023680__ 397 ATTGAAACACCGTTTATCGCGGGTGTCGCCATGGACGGAATTGAAGTAAA 446
BSNT_03782___ 447 AGCGAAAGCGAGAATCACAGTAAGAGCGAATATCGAGCGCCTCGTCGGGG 496
|||.|||||.||||||||.||||||||.|||||.||||||||.|||||.|
RBAM_023680__ 447 AGCAAAAGCCAGAATCACGGTAAGAGCCAATATTGAGCGCCTTGTCGGAG 496
BSNT_03782___ 497 GAGCAGGGGAAGAAACCATTGTAGCTCGTGTAGGTGAGGGGATCGTTTCT 546
||||.||.|||||.||..||||.||.|||||.||.||.|||||.||.||.
RBAM_023680__ 497 GAGCGGGAGAAGAGACGGTTGTCGCCCGTGTCGGAGAAGGGATTGTCTCG 546
BSNT_03782___ 547 ACAATCGGTTCATCTGATAATCATAAAAAAGTGCTTGAAAACCCTGACAT 596
|||||||||||.|||.|.|||||||||||||||||||||||||||||.||
RBAM_023680__ 547 ACAATCGGTTCTTCTCACAATCATAAAAAAGTGCTTGAAAACCCTGATAT 596
BSNT_03782___ 597 GATTTCTCAGACAGTCCTTGGAAAAGGATTGGACTCAGGAACTGCGTTTG 646
||||||.|||||.||.|||||.|||||..||||.|||||.||.||.||||
RBAM_023680__ 597 GATTTCGCAGACCGTACTTGGCAAAGGGCTGGATTCAGGCACCGCATTTG 646
BSNT_03782___ 647 AAATTCTCTCAATTGATATTGCAGATGTAGATATCGGCAAAAACATCGGT 696
|||||||.||.|||||.||.||.||.||.||||||||||||||||||||.
RBAM_023680__ 647 AAATTCTTTCGATTGACATCGCCGACGTTGATATCGGCAAAAACATCGGA 696
BSNT_03782___ 697 GCAATTTTACAAACCGATCAGGCTGAGGCTGATAAAAACATCGCGCAGGC 746
||.|||.|.||.||.||||||||.||.||.||.||||||||.||||||||
RBAM_023680__ 697 GCGATTCTTCAGACGGATCAGGCAGAAGCAGACAAAAACATTGCGCAGGC 746
BSNT_03782___ 747 AAAAGCGGAAGAACGACGTGCGATGGCTGTCGCTCAAGAACAGGAAATGC 796
.|||||.|||||.||.||.||.|||||.|||||.|||||.||||||||||
RBAM_023680__ 747 CAAAGCCGAAGAGCGCCGCGCCATGGCGGTCGCCCAAGAGCAGGAAATGC 796
BSNT_03782___ 797 GTGCCCGCGTAGAAGAAATGCGCGCGAAAGTAGTAGAAGCCGAGGCGGAA 846
|.||.|||||||||||||||||.||.|||||.||.|||||.||.||.|||
RBAM_023680__ 797 GCGCTCGCGTAGAAGAAATGCGTGCAAAAGTCGTGGAAGCAGAAGCCGAA 846
BSNT_03782___ 847 GTGCCGCTTGCGATGGCAGAAGCTTTGCGCGAAGGGAATATTGGCGTCAT 896
|||||||||||||||||||||||.|||||.|||||.||.||.||||||||
RBAM_023680__ 847 GTGCCGCTTGCGATGGCAGAAGCGTTGCGTGAAGGAAACATCGGCGTCAT 896
BSNT_03782___ 897 GGATTACATGAATATCAAGAATATCGATGCTGACACAGAAATGCGTGATT 946
|||.||.|||||.||.||.||||||||.||.||.||.||.|||.|.||||
RBAM_023680__ 897 GGACTATATGAACATAAAAAATATCGACGCGGATACGGACATGAGGGATT 946
BSNT_03782___ 947 CATTCGGCAAGCTGACGAAAGACCCTTCGGATGAAGACCGCAAATCATAA 996
|..||||||||||||||||.||||.....|||||||||| ||..||||
RBAM_023680__ 947 CTATCGGCAAGCTGACGAATGACCAGCAAGATGAAGACC---AACAATAA 993
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