Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03781 and RBAM_023670

See DNA alignment / Visit BSNT_03781 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:05
# Commandline: needle
#    -asequence pep-align/BSNT_03781___yqfB.1.9828.seq
#    -bsequence pep-align/RBAM_023670___yqfB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03781___yqfB-RBAM_023670___yqfB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03781___yqfB-RBAM_023670___yqfB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03781___yqfB
# 2: RBAM_023670___yqfB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 146
# Identity:      71/146 (48.6%)
# Similarity:    92/146 (63.0%)
# Gaps:           9/146 ( 6.2%)
# Score: 330.0
# 
#
#=======================================

BSNT_03781___      1 MEDLLTNPLIIAAIIGIISAIFGKKSKEEKQNSQKRKKPQHVQSASSQKK     50
                     |.::|||||:|||:|||||||||||:|:||:....|  |.:......||:
RBAM_023670__      1 MHEILTNPLVIAAVIGIISAIFGKKNKDEKRPPGTR--PGNQAKKQDQKQ     48

BSNT_03781___     51 QSKEDAP--APIP-----NRMEQARREAEERRRETARNLKGLERDLAAAK     93
                     ..||..|  ..:|     |..||.|||||:|..||.:...|.|..|.:|:
RBAM_023670__     49 PQKEHKPEAEELPDVSEENPFEQKRREAEKRLAETEQMFNGFEHKLTSAR     98

BSNT_03781___     94 QKTVYTKQKMLQVNKDTVVQGIVLGEVFGPPRAKKPHRTMRSARKN    139
                     .:....|:..|::||:|.||||:..||.|||||||||||||:..|.
RBAM_023670__     99 ARNASLKKSALKINKETAVQGIIFSEVLGPPRAKKPHRTMRNIGKK    144


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