Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03779 and RBAM_023660

See DNA alignment / Visit BSNT_03779 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:05
# Commandline: needle
#    -asequence pep-align/BSNT_03779___yqfC.1.9828.seq
#    -bsequence pep-align/RBAM_023660___yqfC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03779___yqfC-RBAM_023660___yqfC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03779___yqfC-RBAM_023660___yqfC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03779___yqfC
# 2: RBAM_023660___yqfC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 93
# Identity:      88/93 (94.6%)
# Similarity:    90/93 (96.8%)
# Gaps:           0/93 ( 0.0%)
# Score: 447.0
# 
#
#=======================================

BSNT_03779___      1 MGQRKNRMKAWLTRALEIPPDVMMDLPRITMVGRLHIYIENHRGLLLFSE     50
                     |||||||:||||||||||||||||||||||||||||||||||||||||||
RBAM_023660__      1 MGQRKNRVKAWLTRALEIPPDVMMDLPRITMVGRLHIYIENHRGLLLFSE     50

BSNT_03779___     51 NEVRLMLKQGQCIISGKNFVIKAILPEEILLEGTIDVVRYVES     93
                     .|||||||||||||||||.|||||||||||||||||.||||:|
RBAM_023660__     51 EEVRLMLKQGQCIISGKNLVIKAILPEEILLEGTIDHVRYVDS     93


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