Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03778 and RBAM_023650
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:05
# Commandline: needle
# -asequence pep-align/BSNT_03778___yqfD.1.9828.seq
# -bsequence pep-align/RBAM_023650___yqfD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03778___yqfD-RBAM_023650___yqfD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03778___yqfD-RBAM_023650___yqfD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03778___yqfD
# 2: RBAM_023650___yqfD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 398
# Identity: 307/398 (77.1%)
# Similarity: 346/398 (86.9%)
# Gaps: 4/398 ( 1.0%)
# Score: 1604.5
#
#
#=======================================
BSNT_03778___ 1 MKNKWLSFFSGKVQLELTGRGIERLLNECTRQGIPVFHVKKKKEAVSLYI 50
||||||||||||||:|:.|:|||||||||||.||.:|.||||::.|.|.|
RBAM_023650__ 1 MKNKWLSFFSGKVQVEVKGKGIERLLNECTRNGIAIFAVKKKQDCVLLMI 50
BSNT_03778___ 51 QLQDVHAFRRVRSKFKCKARFIHRKGFPFLLLKSKLNIGFTIGFAIFFIL 100
|||||||||||..|.:|||.|..|||.||||||||||:|||.||.|||::
RBAM_023650__ 51 QLQDVHAFRRVIRKHECKASFTKRKGLPFLLLKSKLNLGFTAGFVIFFVI 100
BSNT_03778___ 101 LFLLSNMVWKIDVTGAKPETEHQMRQHLNEIGVKKGRLQFLMMSPEKIQK 150
|||||||:|:||:.||||||||||.:||.||||||||||||||:||||||
RBAM_023650__ 101 LFLLSNMIWEIDIKGAKPETEHQMVKHLEEIGVKKGRLQFLMMTPEKIQK 150
BSNT_03778___ 151 SLTNGIDNITWVGVDLKGTTIHMKVVEKNEPEKEKYVSPRNIVAKKKATI 200
||||||||||||||:|.||.:||||||||||.||||||||:|||||||.|
RBAM_023650__ 151 SLTNGIDNITWVGVELNGTALHMKVVEKNEPTKEKYVSPRHIVAKKKAVI 200
BSNT_03778___ 201 TRMFVQKGQPMAAIHDHVEKGQLLVSGLIGSEDHQQEVASKAEIYGETWY 250
.|||||||||||.::|||:|||||||||||:|| ::|||||||||||||
RBAM_023650__ 201 KRMFVQKGQPMAFVNDHVDKGQLLVSGLIGNED--RKVASKAEIYGETWY 248
BSNT_03778___ 251 RSEVTVPLETLFNVYTGKVRTKHKLSFGSLAIPIWGMTFKKEELKHPKTE 300
:|||||||||.|.:|||||||||||||||..:|.||..|.:|.|||||||
RBAM_023650__ 249 KSEVTVPLETSFTLYTGKVRTKHKLSFGSWGVPFWGFGFNEEPLKHPKTE 298
BSNT_03778___ 301 QEKHSLHFLGFKLPVSYVKEQTRESEEALRKYTKEEAVQEGIKLGKQDVE 350
:|||...|||.|||||||.|||||||.::|.|||.||||.|||:|:||||
RBAM_023650__ 299 EEKHPFQFLGMKLPVSYVSEQTRESETSVRTYTKGEAVQAGIKMGRQDVE 348
BSNT_03778___ 351 DKIGENGEVKSEKVLHQTVENGKVKLIILYQVIEDIVQTTPIVRETEE 398
.::..:|||:|||||||:|||||||||||||||||||||||||:..
RBAM_023650__ 349 KRLNGSGEVESEKVLHQSVENGKVKLIILYQVIEDIVQTTPIVQGD-- 394
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