Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03758 and RBAM_023510
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:03
# Commandline: needle
# -asequence pep-align/BSNT_03758___sigA.1.9828.seq
# -bsequence pep-align/RBAM_023510___rpoD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03758___sigA-RBAM_023510___rpoD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03758___sigA-RBAM_023510___rpoD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03758___sigA
# 2: RBAM_023510___rpoD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 373
# Identity: 367/373 (98.4%)
# Similarity: 369/373 (98.9%)
# Gaps: 2/373 ( 0.5%)
# Score: 1840.5
#
#
#=======================================
BSNT_03758___ 1 MADKQTH--ETELTFDQVKEQLTESGKKRGVLTYEEIAERMSSFEIESDQ 48
||||||| |||||.|||||||||:|||||||||||||||||||||||||
RBAM_023510__ 1 MADKQTHETETELTLDQVKEQLTETGKKRGVLTYEEIAERMSSFEIESDQ 50
BSNT_03758___ 49 MDEYYEFLGEQGVELISENEETEDPNIQQLAKAEEEFDLNDLSVPPGVKI 98
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_023510__ 51 MDEYYEFLGEQGVELISENEETEDPNIQQLAKAEEEFDLNDLSVPPGVKI 100
BSNT_03758___ 99 NDPVRMYLKEIGRVNLLSAKEEIAYAKKIEEGDEESKRRLAEANLRLVVS 148
|||||||||||||||||||||||.||:|||||||||||||||||||||||
RBAM_023510__ 101 NDPVRMYLKEIGRVNLLSAKEEITYAQKIEEGDEESKRRLAEANLRLVVS 150
BSNT_03758___ 149 IAKRYVGRGMLFLDLIQEGNMGLMKAVEKFDYRKGYKFSTYATWWIRQAI 198
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_023510__ 151 IAKRYVGRGMLFLDLIQEGNMGLMKAVEKFDYRKGYKFSTYATWWIRQAI 200
BSNT_03758___ 199 TRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREPTPEEIAEDMDL 248
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_023510__ 201 TRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREPTPEEIAEDMDL 250
BSNT_03758___ 249 TPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEATSPSDHAAYEL 298
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_023510__ 251 TPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEATSPSDHAAYEL 300
BSNT_03758___ 299 LKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQ 348
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_023510__ 301 LKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQ 350
BSNT_03758___ 349 IEAKALRKLRHPSRSKRLKDFLE 371
|||||||||||||||||||||||
RBAM_023510__ 351 IEAKALRKLRHPSRSKRLKDFLE 373
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