Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03756 and RBAM_023500

See DNA alignment / Visit BSNT_03756 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:03
# Commandline: needle
#    -asequence pep-align/BSNT_03756___cccA.1.9828.seq
#    -bsequence pep-align/RBAM_023500___cccA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03756___cccA-RBAM_023500___cccA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03756___cccA-RBAM_023500___cccA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03756___cccA
# 2: RBAM_023500___cccA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 120
# Identity:     102/120 (85.0%)
# Similarity:   113/120 (94.2%)
# Gaps:           0/120 ( 0.0%)
# Score: 545.0
# 
#
#=======================================

BSNT_03756___      1 MKWNPLIPFLMIAVLGIGLTFFLSVKGLDDSREIASGGESKSAEKKDANA     50
                     ||||||||||:||||||||||||:|||..|:.:||||||||:|||:.|||
RBAM_023500__      1 MKWNPLIPFLLIAVLGIGLTFFLAVKGNGDAHQIASGGESKNAEKETANA     50

BSNT_03756___     51 SPEEIYKANCIACHGENYEGVSGPSLKGVGDKKDVAEIKTKIEKGGNGMP    100
                     |||||||||||.||||||||||||:|||||.:||||||||||||||||||
RBAM_023500__     51 SPEEIYKANCITCHGENYEGVSGPNLKGVGKRKDVAEIKTKIEKGGNGMP    100

BSNT_03756___    101 SGLVPADKLDDMAEWVSKIK    120
                     :|||||:||||||:|||.||
RBAM_023500__    101 AGLVPAEKLDDMAKWVSDIK    120


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