Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03756 and RBAM_023500
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:03
# Commandline: needle
# -asequence dna-align/BSNT_03756___cccA.1.9828.seq
# -bsequence dna-align/RBAM_023500___cccA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03756___cccA-RBAM_023500___cccA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03756___cccA-RBAM_023500___cccA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03756___cccA
# 2: RBAM_023500___cccA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 365
# Identity: 288/365 (78.9%)
# Similarity: 288/365 (78.9%)
# Gaps: 4/365 ( 1.1%)
# Score: 1108.0
#
#
#=======================================
BSNT_03756___ 1 ATGAAATGGAACCCGCTTATTCCATTTTTGATGATCGCTGTTTTAGGAAT 50
|||||.|||||.|||||.|||||.||||||.|.||.||.||..|.|||||
RBAM_023500__ 1 ATGAAGTGGAATCCGCTGATTCCTTTTTTGCTCATTGCAGTGCTGGGAAT 50
BSNT_03756___ 51 TGGTCTAACTTTCTTTTTATCAGTAAAAGG-ACTTGATGACTCTCGGGAG 99
.||.||.||||||||||||.|.|||||||| |.|.|| ||..|.|...||
RBAM_023500__ 51 AGGGCTGACTTTCTTTTTAGCTGTAAAAGGCAATGGA-GATGCGCATCAG 99
BSNT_03756___ 100 ATTGCAAGCGGAGGAGAAAGCAAATCTGCTGAAAAGAAAGATGCAAACGC 149
||.||||||||.||.|||||||||..|||.||.|||.||..|||||||||
RBAM_023500__ 100 ATCGCAAGCGGCGGTGAAAGCAAAAATGCCGAGAAGGAAACTGCAAACGC 149
BSNT_03756___ 150 TTCACCAGAAGAAATTTACAAGGCAAACTGCATCGCATGCCACGGTGAAA 199
||||||.|||||.|||||.||.||.|||||||||.|.||.|||||.||||
RBAM_023500__ 150 TTCACCTGAAGAGATTTATAAAGCGAACTGCATCACCTGTCACGGGGAAA 199
BSNT_03756___ 200 ATTATGAAGGCGTTTCGGGTCCGAGCTTAAAGGGTGTAGGGGATAAG-AA 248
|.||||||||.||.||.||.||||.||||||.||.|| .||.|.||| ||
RBAM_023500__ 200 ACTATGAAGGTGTGTCAGGGCCGAACTTAAAAGGCGT-CGGCAAAAGAAA 248
BSNT_03756___ 249 AGATGTCGCTGAAATTAAAACAAAGATCGAAAAAGGCGGTAATGGAATGC 298
||||||||||||.|||||||||||.||.|||||||||||.||.||.||||
RBAM_023500__ 249 AGATGTCGCTGAGATTAAAACAAAAATTGAAAAAGGCGGCAACGGGATGC 298
BSNT_03756___ 299 CTTCCGGTCTTGTTCCGGCCGATAAGCTGGATGATATGGCAGAGTGGGTA 348
|..|.||.|||||.||||||||.|||||||||||.||||||.|.|||||.
RBAM_023500__ 299 CCGCGGGACTTGTGCCGGCCGAAAAGCTGGATGACATGGCAAAATGGGTT 348
BSNT_03756___ 349 TCAAAAATTAAATAA 363
||..|.|||||||||
RBAM_023500__ 349 TCTGACATTAAATAA 363
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