Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03754 and RBAM_023490
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:03
# Commandline: needle
# -asequence pep-align/BSNT_03754___yqfN.1.9828.seq
# -bsequence pep-align/RBAM_023490___yqfN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03754___yqfN-RBAM_023490___yqfN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03754___yqfN-RBAM_023490___yqfN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03754___yqfN
# 2: RBAM_023490___yqfN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 235
# Identity: 165/235 (70.2%)
# Similarity: 189/235 (80.4%)
# Gaps: 20/235 ( 8.5%)
# Score: 850.0
#
#
#=======================================
BSNT_03754___ 1 -------------------MADIGSDHAYLPCYAVLNHKASGAIAGEITD 31
:||||||||||||||||||.||.||||||||
RBAM_023490__ 1 MKLSKRLQSVAEYIPPGALVADIGSDHAYLPCYAVLNHLASRAIAGEITD 50
BSNT_03754___ 32 GPFLSAKRQVEKSGLNSHISVRQGDGLEVIKKGEADAITIAGMGGALIAH 81
|||||||:||||..|::.||||:||||.|::||||.||||||||||||||
RBAM_023490__ 51 GPFLSAKQQVEKLDLSTLISVRKGDGLSVLEKGEAGAITIAGMGGALIAH 100
BSNT_03754___ 82 ILEAGKDKLTGKERLILQPNIHAVHIREWLYKEGYALIDEVILEEDGKCY 131
|||:||.||||:|||||||||||||||||||:|||.||||||||||||||
RBAM_023490__ 101 ILESGKTKLTGRERLILQPNIHAVHIREWLYQEGYELIDEVILEEDGKCY 150
BSNT_03754___ 132 EVLVAEAGDRDAAYDGISLSAGMLVGPFLAKEKNAVFLKKWTQELQHTQS 181
|:||||.|||||.|..:.::||||.||||.||:|.|||:||:|||:||:.
RBAM_023490__ 151 EILVAETGDRDAPYRDVPMAAGMLAGPFLLKERNEVFLRKWSQELKHTEQ 200
BSNT_03754___ 182 IYEQISQAADTEQNKQKLKELSDRMELLKEVIDHG 216
||||||::|..| |.:||.||.:|:.||||||.|.
RBAM_023490__ 201 IYEQISRSAKHE-NHEKLAELKERISLLKEVIGHA 234
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