Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03752 and RBAM_023480

See DNA alignment / Visit BSNT_03752 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:02
# Commandline: needle
#    -asequence pep-align/BSNT_03752___yqfO.1.9828.seq
#    -bsequence pep-align/RBAM_023480___yqfO.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03752___yqfO-RBAM_023480___yqfO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03752___yqfO-RBAM_023480___yqfO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03752___yqfO
# 2: RBAM_023480___yqfO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 373
# Identity:     310/373 (83.1%)
# Similarity:   342/373 (91.7%)
# Gaps:           0/373 ( 0.0%)
# Score: 1647.0
# 
#
#=======================================

BSNT_03752___      1 MDKSVNGQQIIQLFEQFSPKAYAVEGDKIGLQIGTLNKPIKNVMVTLDVL     50
                     |.|.||||:||||||||||||:|||||||||||||||||:||||||||||
RBAM_023480__      1 MLKHVNGQEIIQLFEQFSPKAFAVEGDKIGLQIGTLNKPVKNVMVTLDVL     50

BSNT_03752___     51 ESVIDEAIEKEVDLIIAHHPPIFRPLKHISTDQPAGRLIEKCLKHDIAVY    100
                     |..:||||||:||||||||||||||||.|:||||.|||||||:|||||||
RBAM_023480__     51 EQTVDEAIEKKVDLIIAHHPPIFRPLKQITTDQPGGRLIEKCIKHDIAVY    100

BSNT_03752___    101 AAHTNLDVADGGVNDLLAEALELSETEVLAPTYTDPLKKLAVYVPKEYEE    150
                     |||||||||||||||||||||.|::||||.|||:||||||||||||:|||
RBAM_023480__    101 AAHTNLDVADGGVNDLLAEALGLTDTEVLVPTYSDPLKKLAVYVPKDYEE    150

BSNT_03752___    151 QVRAAVGNAGAGHIGEYSHCAFSSEGIGSFKPLDGAKPFIGEVGELELVH    200
                     .||.|:|||||||||.|||||||||||||||||:||:||||:.|||||||
RBAM_023480__    151 AVRTALGNAGAGHIGNYSHCAFSSEGIGSFKPLEGAEPFIGQTGELELVH    200

BSNT_03752___    201 EVRLETVFPKSIEKAVINAMIKSHPYEEVAYDIYPVEQTPAEKGLGRVGT    250
                     |||||||||.|:||.|:.|:.|||||||||||||||||:|.||||||:|.
RBAM_023480__    201 EVRLETVFPASMEKTVVKALKKSHPYEEVAYDIYPVEQSPLEKGLGRIGK    250

BSNT_03752___    251 LKTEMTLKEFALFVKDKLDVNGVRMVGDADSMVKKVAVLGGDGNKYIHHA    300
                     |:.||||:|||||||:|.|||||||||:.:|.|||||||||||||||:.|
RBAM_023480__    251 LQQEMTLEEFALFVKEKFDVNGVRMVGERNSKVKKVAVLGGDGNKYIYQA    300

BSNT_03752___    301 KRKGADVYVTGDLYFHVAHDAMMLGLNVVDPGHYAEKIMKEGVTRKLTSM    350
                     |||||||||||||||||||||||:|||||||||||||||::|...|||:|
RBAM_023480__    301 KRKGADVYVTGDLYFHVAHDAMMMGLNVVDPGHYAEKIMRKGTAEKLTAM    350

BSNT_03752___    351 CNDKKFDVNIFVSETDTNPFTFL    373
                     ..:|.:||.||.|||||||||||
RBAM_023480__    351 AGEKNYDVRIFASETDTNPFTFL    373


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