Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03747 and RBAM_023450

See DNA alignment / Visit BSNT_03747 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:02
# Commandline: needle
#    -asequence pep-align/BSNT_03747___yqfR.1.9828.seq
#    -bsequence pep-align/RBAM_023450___yqfR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03747___yqfR-RBAM_023450___yqfR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03747___yqfR-RBAM_023450___yqfR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03747___yqfR
# 2: RBAM_023450___yqfR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 447
# Identity:     388/447 (86.8%)
# Similarity:   410/447 (91.7%)
# Gaps:           9/447 ( 2.0%)
# Score: 2015.0
# 
#
#=======================================

BSNT_03747___      1 MCRFKELGKMKETKFELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKK     50
                              ||||||:.|.||||||||||||||||||||||||||||||.
RBAM_023450__      1 ---------MKETKFDGYNLKPFIIDAVHRLGFYEPTDIQKRLIPAVLKN     41

BSNT_03747___     51 ESVIGQSQTGTGKTHAYLLPLLNKIDPAKDVVQVVITAPTRELANQIYQE    100
                     ||||||||||||||||||||:||:|||..|.||.|||||||||||||:||
RBAM_023450__     42 ESVIGQSQTGTGKTHAYLLPILNRIDPGSDTVQAVITAPTRELANQIHQE     91

BSNT_03747___    101 ALKITQGEEGSQIRSKCFIGGTDKQKSIDKLKIQPHLVVGTPGRIADLIK    150
                     |||||||.|...||:|||||||||||||||||.|||||||||||||||||
RBAM_023450__     92 ALKITQGAEDEPIRTKCFIGGTDKQKSIDKLKTQPHLVVGTPGRIADLIK    141

BSNT_03747___    151 EQALSVHKAESLVIDEADLMLDMGFLADVDYIGSRMPEDLQMLVFSATIP    200
                     .|||:|:||:||||||||||||||||.|||||||||||:|||||||||||
RBAM_023450__    142 AQALNVYKAQSLVIDEADLMLDMGFLEDVDYIGSRMPEELQMLVFSATIP    191

BSNT_03747___    201 EKLKPFLKKYMENPKYAHVEPKQVTAAKIEHILIPSKHRDKDKLLFDIMS    250
                     ||||||||||||||||||||||::||.||||:|:|||.||||||||::||
RBAM_023450__    192 EKLKPFLKKYMENPKYAHVEPKRITAEKIEHVLVPSKQRDKDKLLFEMMS    241

BSNT_03747___    251 HLNPYLGIVFANTKNTADHIAQYLTGKGMKIGLLHGGLTPRERKKVMKQI    300
                     |||||||||||||||||||||:|||.|||::|||||||||||||||||||
RBAM_023450__    242 HLNPYLGIVFANTKNTADHIAKYLTEKGMRVGLLHGGLTPRERKKVMKQI    291

BSNT_03747___    301 NDLEFTYVIATDLAARGIDIKGVSHVINYELPDDLDFYVHRVGRTARAGS    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_023450__    292 NDLEFTYVIATDLAARGIDIKGVSHVINYELPDDLDFYVHRVGRTARAGS    341

BSNT_03747___    351 SGQAMTIYELTDEDALVRLEKMGIEFDYLELEKGEWKKGDDRQRRKKRKK    400
                     ||||:|||||:|||||.|||||||.|||.||..|||||||||.|||.|||
RBAM_023450__    342 SGQALTIYELSDEDALARLEKMGIVFDYAELVNGEWKKGDDRHRRKNRKK    391

BSNT_03747___    401 TPNEADEIAHRLVKKPKKVKPGYKKKMSYEMEKIKKKQRRNQSKKRK    447
                     |.||||:||.|||||||||||||||||||||||||||||||||.:.|
RBAM_023450__    392 TANEADQIAKRLVKKPKKVKPGYKKKMSYEMEKIKKKQRRNQSNRGK    438


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