Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03746 and RBAM_023440

See DNA alignment / Visit BSNT_03746 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:02
# Commandline: needle
#    -asequence pep-align/BSNT_03746___yqfS.1.9828.seq
#    -bsequence pep-align/RBAM_023440___yqfS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03746___yqfS-RBAM_023440___yqfS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03746___yqfS-RBAM_023440___yqfS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03746___yqfS
# 2: RBAM_023440___yqfS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 297
# Identity:     264/297 (88.9%)
# Similarity:   276/297 (92.9%)
# Gaps:           9/297 ( 3.0%)
# Score: 1396.0
# 
#
#=======================================

BSNT_03746___      1 ---------MSGKHMLLAASQEAVSYGANTFMIYTGAPQNTRRKKIEDLN     41
                              |||||||||||:|||||||||||||||||||||||||||||
RBAM_023440__      1 MLKIGSHVSMSGKHMLLAASKEAVSYGANTFMIYTGAPQNTRRKKIEDLN     50

BSNT_03746___     42 IEAGRAHMQENGIDEIIVHAPYIINIGNTTNPSTFELGVDFLRSEIERTA     91
                     ||||||||:|||||||:|||||||||||||||:|||||||||||||||||
RBAM_023440__     51 IEAGRAHMKENGIDEIVVHAPYIINIGNTTNPATFELGVDFLRSEIERTA    100

BSNT_03746___     92 AIGAKQIVLHPGAHVGAGAEAGIKKIIEGLNEVIDPNQNVQIALETMAGK    141
                     ||||:|||||||||||||||.|||||||||||||.|.|||||||||||||
RBAM_023440__    101 AIGARQIVLHPGAHVGAGAETGIKKIIEGLNEVIVPGQNVQIALETMAGK    150

BSNT_03746___    142 GSECGRSFEELAQIIEGVTHNEQLSVCFDTCHTHDAGYNIVEDFDGVLNE    191
                     ||||||||||||:||.||||||.|||||||||||||||::..||||||||
RBAM_023440__    151 GSECGRSFEELAEIIAGVTHNEHLSVCFDTCHTHDAGYDVANDFDGVLNE    200

BSNT_03746___    192 FDKIIGIDRIKVLHINDSKNVKGARKDRHENIGFGEIGFDALQYVVHHEQ    241
                     ||||:|||||||||:|||||:|||||||||||||||||||||||:|||||
RBAM_023440__    201 FDKIVGIDRIKVLHVNDSKNIKGARKDRHENIGFGEIGFDALQYIVHHEQ    250

BSNT_03746___    242 LKDIPKILETPYVGEDKKNKKPPYRFEIEMLKEKQFDDTLLEKILQQ    288
                     |.|||||||||||||||||||||||||||||||||||..|||||..|
RBAM_023440__    251 LADIPKILETPYVGEDKKNKKPPYRFEIEMLKEKQFDKELLEKISAQ    297


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