Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03746 and RBAM_023440
See
Amino acid alignment /
Visit
BSNT_03746 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:02
# Commandline: needle
# -asequence dna-align/BSNT_03746___yqfS.1.9828.seq
# -bsequence dna-align/RBAM_023440___yqfS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03746___yqfS-RBAM_023440___yqfS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03746___yqfS-RBAM_023440___yqfS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03746___yqfS
# 2: RBAM_023440___yqfS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 900
# Identity: 691/900 (76.8%)
# Similarity: 691/900 (76.8%)
# Gaps: 39/900 ( 4.3%)
# Score: 2712.0
#
#
#=======================================
BSNT_03746___ 1 ---------------------------ATGAGCGGAAAACATATGCTTCT 23
||||||||||||||||||||.||
RBAM_023440__ 1 TTGCTGAAAATAGGTTCACACGTCTCAATGAGCGGAAAACATATGCTCCT 50
BSNT_03746___ 24 GGCTGCAAGCCAGGAAGCAGTCTCTTATGGGGCGAATACGTTTATGATCT 73
.||.||||||.|||||||.||.||.||.||||||||.||.||||||||||
RBAM_023440__ 51 TGCCGCAAGCAAGGAAGCTGTTTCGTACGGGGCGAACACATTTATGATCT 100
BSNT_03746___ 74 ATACAGGCGCACCGCAAAATACGCGCCGAAAGAAAATTGAAGACTTAAAT 123
||||.|||||.||.|||||.||||||||.||.||||||||.|||||.|||
RBAM_023440__ 101 ATACGGGCGCTCCCCAAAACACGCGCCGCAAAAAAATTGAGGACTTGAAT 150
BSNT_03746___ 124 ATAGAAGCAGGCCGGGCACATATGCAAGAAAACGGCATTGACGAGATTAT 173
||.|||||.|||||.||.||||||.|.|||||||||||.||.||||||.|
RBAM_023440__ 151 ATTGAAGCGGGCCGCGCCCATATGAAGGAAAACGGCATCGATGAGATTGT 200
BSNT_03746___ 174 CGTACACGCGCCTTATATTATTAATATTGGCAACACGACAAATCCGTCCA 223
|||.||.|||||.||.||.|||||.|||||.||.||||||||||||.|.|
RBAM_023440__ 201 CGTGCATGCGCCGTACATCATTAACATTGGAAATACGACAAATCCGGCAA 250
BSNT_03746___ 224 CTTTTGAGCTGGGTGTTGATTTTCTTCGTTCAGAAATTGAACGGACAGCG 273
|.|||||||||||.|||||||||||.|||||.|||||||||.|.||.||.
RBAM_023440__ 251 CATTTGAGCTGGGCGTTGATTTTCTGCGTTCTGAAATTGAAAGAACGGCA 300
BSNT_03746___ 274 GCCATCGGAGCGAAGCAAATTGTCCTTCATCCTGGTGCTCACGTAGGGGC 323
||.|||||.||||..||.||.||.||||||||.||.||.||.||.||.||
RBAM_023440__ 301 GCGATCGGCGCGAGACAGATCGTGCTTCATCCAGGGGCGCATGTCGGAGC 350
BSNT_03746___ 324 AGGAGCTGAAGCCGGCATCAAAAAAATTATTGAAGGCTTAAATGAAGTGA 373
.||.|||||..|.||||||||||||||.||||||||.|||||.|||||||
RBAM_023440__ 351 CGGGGCTGAGACGGGCATCAAAAAAATCATTGAAGGTTTAAACGAAGTGA 400
BSNT_03746___ 374 TTGATCCGAATCAAAATGTCCAGATTGCATTAGAAACAATGGCTGGAAAA 423
|||.|||....|||||.||.||||||||..|.||.||||||||.||.|||
RBAM_023440__ 401 TTGTTCCCGGGCAAAACGTGCAGATTGCGCTGGAGACAATGGCGGGCAAA 450
BSNT_03746___ 424 GGATCGGAATGCGGCAGAAGCTTTGAGGAGCTTGCACAGATTATCGAAGG 473
|||||.||||||||.|||||||||||.|||||.||..||||.||.|..||
RBAM_023440__ 451 GGATCAGAATGCGGAAGAAGCTTTGAAGAGCTGGCCGAGATCATTGCGGG 500
BSNT_03746___ 474 CGTTACACACAATGAGCAGCTGTCAGTGTGCTTTGACACGTGCCATACAC 523
.||.||.||.|||||.||.||.||.||.|||||||||||.|||||.||.|
RBAM_023440__ 501 AGTCACGCATAATGAACATCTATCCGTCTGCTTTGACACTTGCCACACCC 550
BSNT_03746___ 524 ATGATGCCGGGTATAACATTGTCG---AAGACTTTGACGGAGTGCTGAAC 570
||||.|||||||||.| ||||| |.||.||||||||.||.||.|||
RBAM_023440__ 551 ATGACGCCGGGTATGA---TGTCGCTAATGATTTTGACGGTGTTCTTAAC 597
BSNT_03746___ 571 GAGTTCGATAAAATCATTGGCATTGACCGTATTAAAGTGCTTCATATCAA 620
|||||.|||||||||.|.|||||.||.||.||.|||||.||||||.|.||
RBAM_023440__ 598 GAGTTTGATAAAATCGTCGGCATCGATCGGATAAAAGTCCTTCATGTTAA 647
BSNT_03746___ 621 TGACAGCAAAAATGTCAAAGGTGCGAGAAAAGACCGCCATGAAAATATTG 670
.|||||.||||||.|.|||||.||..|.||||||||||||||||||||.|
RBAM_023440__ 648 CGACAGTAAAAATATTAAAGGCGCCCGGAAAGACCGCCATGAAAATATCG 697
BSNT_03746___ 671 GCTTTGGTGAAATAGGTTTTGACGCACTGCAATATGTTGTTCACCATGAG 720
|.||.||.||.||.|||||||||||.|||||.||..|.|||||.||.|||
RBAM_023440__ 698 GGTTCGGAGAGATCGGTTTTGACGCTCTGCAGTACATCGTTCATCACGAG 747
BSNT_03746___ 721 CAGTTAAAAGACATTCCAAAAATTCTTGAAACACCATACGTCGGTGAAGA 770
|||.|....||.|||||.|||||.||.||||||||.||.||.||.|||||
RBAM_023440__ 748 CAGCTTGCCGATATTCCGAAAATCCTCGAAACACCGTATGTAGGCGAAGA 797
BSNT_03746___ 771 TAAAAAGAACAAAAAACCGCCATACCGTTTTGAGATTGAAATGCTGAAAG 820
.||.||.||.||.||.|||||.|||||||||||.||.|||||||||||||
RBAM_023440__ 798 CAAGAAAAATAAGAAGCCGCCGTACCGTTTTGAAATCGAAATGCTGAAAG 847
BSNT_03746___ 821 AAAAACAATTTGATGA-TACATTGCTCGAAAAGATTTTACAG--CAATAA 867
||||.||.||||||.| .|..|| ||.|||||.||.| ||| ||||||
RBAM_023440__ 848 AAAAGCAGTTTGATAAGGAGCTT-CTTGAAAAAATAT--CAGCTCAATAA 894
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.