Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03741 and RBAM_023400
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:02
# Commandline: needle
# -asequence pep-align/BSNT_03741___yqfW.1.9828.seq
# -bsequence pep-align/RBAM_023400___yqfW.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03741___yqfW-RBAM_023400___yqfW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03741___yqfW-RBAM_023400___yqfW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03741___yqfW
# 2: RBAM_023400___yqfW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 193
# Identity: 156/193 (80.8%)
# Similarity: 171/193 (88.6%)
# Gaps: 0/193 ( 0.0%)
# Score: 839.0
#
#
#=======================================
BSNT_03741___ 1 MLRLGIDIDGTITAQDTFVPYLNRSFNLSISLNDMTDYDLTKLLNITQEE 50
|||||||||||:||||||||||||||:|||:|:||||||||||||||.||
RBAM_023400__ 1 MLRLGIDIDGTVTAQDTFVPYLNRSFHLSITLDDMTDYDLTKLLNITDEE 50
BSNT_03741___ 51 FWDWMNQNEAIIYKEALLAQHAKQSLDLLKEEHKLIYITARRTHLTDITY 100
||:|||.:||.|||||.||:.|||:||.|||||:||||||||.||.|:|.
RBAM_023400__ 51 FWEWMNVHEAAIYKEAKLAEFAKQALDGLKEEHRLIYITARRGHLEDVTL 100
BSNT_03741___ 101 EWFDRQNIHYDHIELVGGHHKVEAVKNHNIDLFFEDHHGNAMMIAKEAGI 150
:||..::|||||||||||||||||||.|.||||||||||||.||||||||
RBAM_023400__ 101 DWFANRDIHYDHIELVGGHHKVEAVKKHGIDLFFEDHHGNATMIAKEAGI 150
BSNT_03741___ 151 PVILFNSPYNQLPIDSNIIRVNNWLEAVQWMNNNKHHLIRVNN 193
|||||||||||||||||||||.||||||.|:|.|||....|.:
RBAM_023400__ 151 PVILFNSPYNQLPIDSNIIRVQNWLEAVAWINKNKHSFQHVKS 193
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