Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03741 and RBAM_023400

See Amino acid alignment / Visit BSNT_03741 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:02
# Commandline: needle
#    -asequence dna-align/BSNT_03741___yqfW.1.9828.seq
#    -bsequence dna-align/RBAM_023400___yqfW.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03741___yqfW-RBAM_023400___yqfW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03741___yqfW-RBAM_023400___yqfW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03741___yqfW
# 2: RBAM_023400___yqfW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 594
# Identity:     440/594 (74.1%)
# Similarity:   440/594 (74.1%)
# Gaps:          24/594 ( 4.0%)
# Score: 1573.0
# 
#
#=======================================

BSNT_03741___      1 ATGTTACGCTTAGGAATAGATATTGACGGCACAATCACGGCTCAGGATAC     50
                     ||||||||.|||||.||||||||||||||||||.|.|||||.||||||||
RBAM_023400__      1 ATGTTACGGTTAGGTATAGATATTGACGGCACAGTTACGGCACAGGATAC     50

BSNT_03741___     51 ATTCGTCCCTTATTTGAACCGTTCGTTTAATCTTTCCATTTCATTAAACG    100
                     |||.|||||||||||.|||||.||.|||.|||||||||||.|.||..|.|
RBAM_023400__     51 ATTTGTCCCTTATTTAAACCGCTCATTTCATCTTTCCATTACCTTGGATG    100

BSNT_03741___    101 ATATGACGGATTATGATTTAACAAAGCTGTTAAACATTACCCAGGAAGAA    150
                     |||||||.|||||||||.|.||.|||||.||.||||||||..|.||.|||
RBAM_023400__    101 ATATGACTGATTATGATCTGACGAAGCTTTTGAACATTACAGACGAGGAA    150

BSNT_03741___    151 TTTTGGGATTGGATGAA---TCAAAATGAAGCGATCATATATAAGGAAGC    197
                     ||||||||.||||||||   ||   |||||||...|||||||||.|||||
RBAM_023400__    151 TTTTGGGAATGGATGAACGTTC---ATGAAGCAGCCATATATAAAGAAGC    197

BSNT_03741___    198 ATTGCTTGCACAGCATGCGAAACAGTCACTTGATCTTCTCAAAGAGGAGC    247
                     ...|||.||..|...|||.||.|||.||||.||....||.|||||.||||
RBAM_023400__    198 GAAGCTCGCGGAATTTGCCAAGCAGGCACTGGACGGACTGAAAGAAGAGC    247

BSNT_03741___    248 ACAAGCTTATTTATATTACAGCGAGACG-GACTCATTTAACTGATATTAC    296
                     ||...||.||.||.|||||.||.||||| |.| ||.|||...|||.||||
RBAM_023400__    248 ACCGTCTGATCTACATTACGGCAAGACGCGGC-CACTTAGAAGATGTTAC    296

BSNT_03741___    297 -CTATGAATGGTTTGACAGACAAA-----ACATTCATTATGACCACATCG    340
                      || .||.|||||||     ||||     ||||||||||.||.|||||.|
RBAM_023400__    297 GCT-GGACTGGTTTG-----CAAACCGGGACATTCATTACGATCACATTG    340

BSNT_03741___    341 AACTCGTTGGCGGTCATCACAAAGTTGAAGCGGTCAAGAATCATAACATC    390
                     |.||.||.||.||.|||||||||||.|||||.|||||.||.||...|||.
RBAM_023400__    341 AGCTTGTCGGAGGCCATCACAAAGTGGAAGCCGTCAAAAAACACGGCATT    390

BSNT_03741___    391 GACCTGTTTTTTGAGGATCATCACGGGAACGCCATGATGATTGCGAAAGA    440
                     ||..|.|||||.||.|||||.|||||.||.||.|..|||||.||.|||||
RBAM_023400__    391 GATTTATTTTTCGAAGATCACCACGGCAATGCGACAATGATCGCAAAAGA    440

BSNT_03741___    441 AGCCGGGATACCGGTGATTTTGTTCAATTCCCCTTATAATCAGCTTCCGA    490
                     |||.||.||.|||||.||..|.||.||.|||||.|||||||||||.||.|
RBAM_023400__    441 AGCAGGCATTCCGGTTATCCTTTTTAACTCCCCATATAATCAGCTCCCCA    490

BSNT_03741___    491 TTGATTCAAACATCATCAGAGTAAACAACTGGCTAGAAGCCGTTCAATGG    540
                     |.|||||.||.||.|||||.||..|.||.|||||.||||||||....|||
RBAM_023400__    491 TCGATTCCAATATTATCAGGGTGCAGAATTGGCTTGAAGCCGTCGCCTGG    540

BSNT_03741___    541 ATGAACAACAACAAGCATCACTTAATACGC--GTCAATAACTGA    582
                     ||.||.||.|||||.|||..|||  |..||  |||||.|.||||
RBAM_023400__    541 ATTAATAAAAACAAACATAGCTT--TCAGCATGTCAAAAGCTGA    582


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