Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03738 and RBAM_023370

See DNA alignment / Visit BSNT_03738 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:01
# Commandline: needle
#    -asequence pep-align/BSNT_03738___yqfZ.1.9828.seq
#    -bsequence pep-align/RBAM_023370___yqfZ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03738___yqfZ-RBAM_023370___yqfZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03738___yqfZ-RBAM_023370___yqfZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03738___yqfZ
# 2: RBAM_023370___yqfZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 100
# Identity:      71/100 (71.0%)
# Similarity:    82/100 (82.0%)
# Gaps:           1/100 ( 1.0%)
# Score: 361.0
# 
#
#=======================================

BSNT_03738___      1 MKRLTLVCSIVFILFILVYDLKIGTIPIQDLPVYEASAKTAVQEPAYKTV     50
                     |||||.|...:|::||:.|||||||||.||||.|.|:|:.|.||.:|:||
RBAM_023370__      1 MKRLTFVFGSLFVIFIIFYDLKIGTIPSQDLPAYAAAAQPARQESSYRTV     50

BSNT_03738___     51 KVKPGDTVMSIVGSAGSPDDIVKDFEALNPNVKANAIQAGTAYKFPVYP-     99
                     .||.|||||||||:..:||||.:|||||||||||||||||||||||||. 
RBAM_023370__     51 TVKKGDTVMSIVGAHKAPDDIAQDFEALNPNVKANAIQAGTAYKFPVYRN    100


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