Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03736 and RBAM_023360

See DNA alignment / Visit BSNT_03736 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:01
# Commandline: needle
#    -asequence pep-align/BSNT_03736___yqgB.1.9828.seq
#    -bsequence pep-align/RBAM_023360___yqgB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03736___yqgB-RBAM_023360___yqgB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03736___yqgB-RBAM_023360___yqgB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03736___yqgB
# 2: RBAM_023360___yqgB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 253
# Identity:     191/253 (75.5%)
# Similarity:   226/253 (89.3%)
# Gaps:           0/253 ( 0.0%)
# Score: 1001.0
# 
#
#=======================================

BSNT_03736___      1 MNVFQLFIKSTYSPRDIAKTRFQGIGKAILYVFLLSVLFAIPTAYYVSTG     50
                     ||:|...:||||||.||||||||||||||||||||||||.:|:|||:.:|
RBAM_023360__      1 MNIFTALLKSTYSPADIAKTRFQGIGKAILYVFLLSVLFTLPSAYYLCSG     50

BSNT_03736___     51 TVKSMNGFKTVLNKDFPDFTISNGKLQTDEKKATESQANGFVIVFDPTDS    100
                     ||.|||||||||.||||||:||||:|||....:.|::||||||||||||:
RBAM_023360__     51 TVNSMNGFKTVLKKDFPDFSISNGELQTKASASKETEANGFVIVFDPTDA    100

BSNT_03736___    101 YGTEQIEAKQNAIGILQNKFVLAIDGQAQEMSYSMMPSELQKKDVIAGLN    150
                     ||.:||.|||||||||:||.|||:||||.||:||:||:::.||::|:.||
RBAM_023360__    101 YGAKQIAAKQNAIGILKNKMVLAVDGQATEMNYSLMPADITKKEIISALN    150

BSNT_03736___    151 QNKAMIVTVLSDLIFLVTAAGKFIEVSFLALIGLIIKNSQKKHLSYHQLW    200
                     |||.|||||||.|:|::|||||||||||||:||||:||:|:|.|:|.|||
RBAM_023360__    151 QNKTMIVTVLSVLLFIMTAAGKFIEVSFLAVIGLILKNAQRKTLNYQQLW    200

BSNT_03736___    201 KLSAYSITLSTVFFTIMRALEATVPSEFLLNWFVNFVILFLVLKEIPSKK    250
                     |||||||||||:||||||||..|||||||:||||||:||||||||||.:|
RBAM_023360__    201 KLSAYSITLSTIFFTIMRALVITVPSEFLVNWFVNFIILFLVLKEIPPRK    250

BSNT_03736___    251 AAV    253
                     .||
RBAM_023360__    251 TAV    253


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