Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03734 and RBAM_023340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:01
# Commandline: needle
# -asequence pep-align/BSNT_03734___sodA.1.9828.seq
# -bsequence pep-align/RBAM_023340___sodA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03734___sodA-RBAM_023340___sodA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03734___sodA-RBAM_023340___sodA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03734___sodA
# 2: RBAM_023340___sodA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 202
# Identity: 186/202 (92.1%)
# Similarity: 196/202 (97.0%)
# Gaps: 1/202 ( 0.5%)
# Score: 1011.0
#
#
#=======================================
BSNT_03734___ 1 MAYELPELPYAYDALEPHIDKETMTIHHTKHHNTYVTNLNKAVEGNTALA 50
|||:||||||||||||||||||||||||||||||||||||||:|| :|||
RBAM_023340__ 1 MAYKLPELPYAYDALEPHIDKETMTIHHTKHHNTYVTNLNKAIEG-SALA 49
BSNT_03734___ 51 NKSVEELVADLDSVPENIRTAVRNNGGGHANHKLFWTLLSPNGGGEPTGA 100
.|||:||||||::|||:|||||||||||||||.||||||||||||||||.
RBAM_023340__ 50 EKSVDELVADLNAVPEDIRTAVRNNGGGHANHSLFWTLLSPNGGGEPTGE 99
BSNT_03734___ 101 LAEEISSVFGSFDKFKEQFAAAAAGRFGSGWAWLVVNNGKLEITSTPNQD 150
|||||.|.|||||:|||:||||||||||||||||||||||||||||||||
RBAM_023340__ 100 LAEEIKSTFGSFDQFKEKFAAAAAGRFGSGWAWLVVNNGKLEITSTPNQD 149
BSNT_03734___ 151 SPLSEGKTPILGLDVWEHAYYLNYQNRRPDYISAFWNVVNWDEVARLYSE 200
|||||||||:||||||||||||||||||||||||||||||||||||||||
RBAM_023340__ 150 SPLSEGKTPVLGLDVWEHAYYLNYQNRRPDYISAFWNVVNWDEVARLYSE 199
BSNT_03734___ 201 AK 202
||
RBAM_023340__ 200 AK 201
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