Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03734 and RBAM_023340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:01
# Commandline: needle
# -asequence dna-align/BSNT_03734___sodA.1.9828.seq
# -bsequence dna-align/RBAM_023340___sodA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03734___sodA-RBAM_023340___sodA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03734___sodA-RBAM_023340___sodA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03734___sodA
# 2: RBAM_023340___sodA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 614
# Identity: 520/614 (84.7%)
# Similarity: 520/614 (84.7%)
# Gaps: 13/614 ( 2.1%)
# Score: 2212.5
#
#
#=======================================
BSNT_03734___ 1 ATGGCTTACGAACTTCCAGAATTACCTTATGCGTACGATGCTTTAGAACC 50
|||||||||.|||||||||||||.|||||.||.||.||||||||||||||
RBAM_023340__ 1 ATGGCTTACAAACTTCCAGAATTGCCTTACGCTTATGATGCTTTAGAACC 50
BSNT_03734___ 51 GCATATCGACAAGGAAACTATGACTATTCACCATACGAAACACCACAACA 100
.||||||||.||||||||.|||||.||||||||||||||.|||||.||||
RBAM_023340__ 51 TCATATCGATAAGGAAACGATGACGATTCACCATACGAAGCACCATAACA 100
BSNT_03734___ 101 CATACGTGACAAATTTAAACAAAGCGGTTGAAGGAAACACTGCTCTTGCC 150
|||||||||||||..|.|||||||||.|.|||||| .|.||.|||||.
RBAM_023340__ 101 CATACGTGACAAACCTCAACAAAGCGATCGAAGGA---TCAGCGCTTGCA 147
BSNT_03734___ 151 AACAAATCAGTTGAAGAGCTTGTTGCAGATCTTG-ATTCTGTTCCTGAAA 199
.|.|||||.||.||.|||||||||||.||| ||| |..|.||.||.||..
RBAM_023340__ 148 GAGAAATCTGTAGATGAGCTTGTTGCTGAT-TTGAACGCAGTGCCGGAGG 196
BSNT_03734___ 200 ACATCCGCACTGCGGTCCGCAACAACGGCGGCGGACACGCGAACCACAAA 249
||||||||||.||.|||||||||||.|||||||||||.||.||||||...
RBAM_023340__ 197 ACATCCGCACGGCAGTCCGCAACAATGGCGGCGGACATGCAAACCACTCT 246
BSNT_03734___ 250 TTATTCTGGACACTTTTATCTCCAAACGGCGGAGGCGAACCGACTGGCGC 299
|||||||||||.|||||||||||.|||||||||||||||||||||||.|.
RBAM_023340__ 247 TTATTCTGGACTCTTTTATCTCCGAACGGCGGAGGCGAACCGACTGGTGA 296
BSNT_03734___ 300 GCTTGCTGAAGAGATC---AGCA-GTGTATTTGGAAGCTTTGACAAATTC 345
|||||||||||||||| |||| | ||.||||||||.||..||||.
RBAM_023340__ 297 GCTTGCTGAAGAGATCAAAAGCACG----TTCGGAAGCTTCGATCAATTT 342
BSNT_03734___ 346 AAAGAGCAATTCGCAGCAGCAGCAGCTGGACGCTTCGGTTCTGGCTGGGC 395
|||||..|||||||.||.|||||.||.||.||.||||||||.||||||||
RBAM_023340__ 343 AAAGAAAAATTCGCCGCCGCAGCTGCAGGCCGTTTCGGTTCAGGCTGGGC 392
BSNT_03734___ 396 ATGGCTTGTTGTGAACAACGGGAAACTTGAAATCACAAGCACGCCAAACC 445
.|||||.|||||.||||||||.|||||||||||.||||||||||||||||
RBAM_023340__ 393 TTGGCTCGTTGTAAACAACGGCAAACTTGAAATTACAAGCACGCCAAACC 442
BSNT_03734___ 446 AAGATTCTCCGCTTTCAGAAGGCAAAACGCCTATCTTAGGTCTTGACGTT 495
|||||||.||||||||||||||.|||||.|||.|..|.||||||||.|||
RBAM_023340__ 443 AAGATTCACCGCTTTCAGAAGGTAAAACACCTGTTCTCGGTCTTGATGTT 492
BSNT_03734___ 496 TGGGAGCATGCTTACTACCTTAACTATCAAAACCGCCGTCCTGATTACAT 545
||||||||.||.||||||||.|||||.|||||||||||||||||||||||
RBAM_023340__ 493 TGGGAGCACGCGTACTACCTGAACTACCAAAACCGCCGTCCTGATTACAT 542
BSNT_03734___ 546 TTCAGCTTTCTGGAATGTTGTAAACTGGGACGAAGTGGCTCGTCTATACA 595
|||||||||||||||||||||.||||||||.|||||.||.|||||.||||
RBAM_023340__ 543 TTCAGCTTTCTGGAATGTTGTGAACTGGGATGAAGTTGCCCGTCTTTACA 592
BSNT_03734___ 596 GCGAAGCAAAATAA 609
||||||||||||||
RBAM_023340__ 593 GCGAAGCAAAATAA 606
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