Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03732 and RBAM_023320
See
DNA alignment /
Visit
BSNT_03732 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:01
# Commandline: needle
# -asequence pep-align/BSNT_03732___pbpA.1.9828.seq
# -bsequence pep-align/RBAM_023320___pbpA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03732___pbpA-RBAM_023320___pbpA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03732___pbpA-RBAM_023320___pbpA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03732___pbpA
# 2: RBAM_023320___pbpA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 718
# Identity: 558/718 (77.7%)
# Similarity: 620/718 (86.4%)
# Gaps: 5/718 ( 0.7%)
# Score: 2821.5
#
#
#=======================================
BSNT_03732___ 1 MRRNKPKKQNHKEKKKSLPIRLNILFLAAFVIFTWIIVELGIKQIVQGDD 50
|||||.|...:||||||||||||.||||||:|||||||||||||||||||
RBAM_023320__ 1 MRRNKKKIAVNKEKKKSLPIRLNFLFLAAFLIFTWIIVELGIKQIVQGDD 50
BSNT_03732___ 51 YKNQANKQEQSEVSSAVPRGKIYDRNFNAIVTNKALNAITYTRSKSTTQE 100
|||.|||||:|:||:|||||||||||.|.|||||||||||||||.||||.
RBAM_023320__ 51 YKNAANKQEESDVSTAVPRGKIYDRNLNPIVTNKALNAITYTRSASTTQA 100
BSNT_03732___ 101 QRLKIAKKLSDMIKVDTKKVTERDKKDYWILTRPKEAKKLISSKERQQVE 150
||||||||||.||||.|||||||||||||:||||.||||||:::|:|:.|
RBAM_023320__ 101 QRLKIAKKLSGMIKVSTKKVTERDKKDYWMLTRPDEAKKLITAEEKQKAE 150
BSNT_03732___ 151 DKKISDDDLYQLQLKRITDKQLNELTDKDMQILAIKRRMDSGYALTPQYI 200
|||:||||||||||||||||||||||.||||||||||:|||||:||||||
RBAM_023320__ 151 DKKLSDDDLYQLQLKRITDKQLNELTSKDMQILAIKRQMDSGYSLTPQYI 200
BSNT_03732___ 201 KNEDVSAKEMAVVSEHLDELPGVDVTSDWEREYPYKNLLRSVLGSVSSSN 250
|||.|||||||||||||||||||||||||||.||.|.||:||||||||||
RBAM_023320__ 201 KNEGVSAKEMAVVSEHLDELPGVDVTSDWERSYPNKGLLKSVLGSVSSSN 250
BSNT_03732___ 251 EGLPSNLLDHYLSLGYSRNDRVGKSYLEYQYESLLQGQKAKVENITDSKG 300
||||||||:|||||||||||||||||||||||:||||||.||.|:|||.|
RBAM_023320__ 251 EGLPSNLLEHYLSLGYSRNDRVGKSYLEYQYENLLQGQKEKVRNVTDSSG 300
BSNT_03732___ 301 NVTGTKTVSEGKAGKDLVLTIDIDLQKSVEKIIEKKLKAAKARPSTELLD 350
|||.|:|||:||||.|||||||.:|||.|||||||.|:||||||||:|||
RBAM_023320__ 301 NVTDTETVSKGKAGDDLVLTIDTELQKDVEKIIEKNLRAAKARPSTQLLD 350
BSNT_03732___ 351 RAFVVMMDPRNGEVLTMAGKQIKRENGAYKFDDYALGAMTSSYAMGSAVK 400
|||||||||||||||||||||||:.:|.||.||||||.|||||.||||||
RBAM_023320__ 351 RAFVVMMDPRNGEVLTMAGKQIKQVDGKYKIDDYALGTMTSSYNMGSAVK 400
BSNT_03732___ 401 GATVLTGLQTGAINLNTVFKDEPLYIGQDKRGKKSWQNLGPVGIQTALEK 450
|||:|||.|||||.:..:|.||.|.| :|...|||...:||:...||||:
RBAM_023320__ 401 GATLLTGYQTGAIKIGNIFTDEVLNI-KDSPPKKSVSVMGPINDLTALER 449
BSNT_03732___ 451 SSNVFMFKTAIAVGKGEYKPHQALPLDTSAFDTFRNYFSQFGLGVKTGID 500
||||:|||||||:|||:|.....||||.||||.||.|||:||||||||||
RBAM_023320__ 450 SSNVYMFKTAIAIGKGKYISGHPLPLDYSAFDKFRYYFSEFGLGVKTGID 499
BSNT_03732___ 501 LPNEMTGYKGTSRLSGFLLDFAIGQYDTYTPLELAQYVSTIANGGYRMKP 550
||||.|||.||.|.||||||||||||||||||::||||||||||||||||
RBAM_023320__ 500 LPNEATGYVGTKRQSGFLLDFAIGQYDTYTPLQMAQYVSTIANGGYRMKP 549
BSNT_03732___ 551 QLVKEVRDSNAKKGIGAVVDSVQPEVLNKVDMKSSYIEEVQAGFRRV--A 598
|:||||| ..:||||||||:||.|||:|::||..|.||.||.||:.| .
RBAM_023320__ 550 QVVKEVR-KPSKKGIGAVVESVNPEVMNRLDMTESEIERVQQGFKLVMNG 598
BSNT_03732___ 599 TKGTAAGQLASASYKPAAKTGTAQSFYDGPDKSKTGTDTYNTTLVAYAPA 648
.:|||....|:.||.||.||||||:|||||.||:||..||||||||||||
RBAM_023320__ 599 AQGTARANFANKSYHPAGKTGTAQAFYDGPIKSRTGASTYNTTLVAYAPA 648
BSNT_03732___ 649 DNPEIAISVVVPWTYIDYNQRYSITNEIGREVMDKYFELKSKQDKEDTQQ 698
|:||:||||||||.|.:||.||||||:||...:|||||||.||:..:|:|
RBAM_023320__ 649 DHPEVAISVVVPWAYENYNDRYSITNDIGEAALDKYFELKKKQEDNNTKQ 698
BSNT_03732___ 699 KNKDKIEENAENTTSSDN 716
||:|||:|:|||..::.
RBAM_023320__ 699 KNEDKIQEDAENGNTNH- 715
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.