Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03731 and RBAM_023290

See DNA alignment / Visit BSNT_03731 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:01
# Commandline: needle
#    -asequence pep-align/BSNT_03731___pstS.1.9828.seq
#    -bsequence pep-align/RBAM_023290___pstS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03731___pstS-RBAM_023290___pstS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03731___pstS-RBAM_023290___pstS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03731___pstS
# 2: RBAM_023290___pstS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 300
# Identity:     252/300 (84.0%)
# Similarity:   277/300 (92.3%)
# Gaps:           0/300 ( 0.0%)
# Score: 1295.0
# 
#
#=======================================

BSNT_03731___      1 MKKNKLVLMLLMAAFMMIAAACGNAGESKKSNSDSAKGEEKASGSLTISG     50
                     |||||.:|||||||.|::|||||||.||.|::|.||..::||||||||||
RBAM_023290__      1 MKKNKWMLMLLMAAVMIVAAACGNAKESGKTDSQSASEDKKASGSLTISG     50

BSNT_03731___     51 SSAMQPLVLAAAEKFMEENPDADIQVQAGGSGTGLSQVSEGAVQIGNSDV    100
                     |||||||||||||||||::||||:||||||||||||||||||||||||||
RBAM_023290__     51 SSAMQPLVLAAAEKFMEKHPDADVQVQAGGSGTGLSQVSEGAVQIGNSDV    100

BSNT_03731___    101 FAEEKEGIDAKALVDHQVAVVGMAAAVNPDAGVKDISKDELKKIFTGKIK    150
                     |||||||||||||.||:||||.|||||||.||||||:|.:|..:||||||
RBAM_023290__    101 FAEEKEGIDAKALKDHRVAVVAMAAAVNPGAGVKDITKKQLTDVFTGKIK    150

BSNT_03731___    151 NWKELGGKDQKITLVNRPDSSGTRATFVKYALDGEEPAEGITEDSSNTVK    200
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
RBAM_023290__    151 NWKELGGKDQKITLVNRPDSSGTRATFVKYALDGAEPAEGITEDSSNTVK    200

BSNT_03731___    201 KIIADTPGAIGYLAFSYLTDDKVTALSIDGVKPEAKNVATGEYPIWAYQH    250
                     ||||:||||||||||||:.|||||.|||.|:|||.|||.|||||||||:|
RBAM_023290__    201 KIIAETPGAIGYLAFSYINDDKVTPLSIGGIKPEEKNVVTGEYPIWAYEH    250

BSNT_03731___    251 SYTKGEATGLAKEFLDYLKSEDIQKSIVTDQGYIPVTDMKVTRDANGKQS    300
                     |||||||:||.|.||||:.|:::|||||.||||||::|||||||||||||
RBAM_023290__    251 SYTKGEASGLTKTFLDYMNSDEVQKSIVKDQGYIPISDMKVTRDANGKQS    300


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