Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03731 and RBAM_023290
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:01
# Commandline: needle
# -asequence dna-align/BSNT_03731___pstS.1.9828.seq
# -bsequence dna-align/RBAM_023290___pstS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03731___pstS-RBAM_023290___pstS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03731___pstS-RBAM_023290___pstS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03731___pstS
# 2: RBAM_023290___pstS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 911
# Identity: 726/911 (79.7%)
# Similarity: 726/911 (79.7%)
# Gaps: 16/911 ( 1.8%)
# Score: 2889.0
#
#
#=======================================
BSNT_03731___ 1 ATGAAAAAAAACAAATTGGTGCTTATGCTTCTGATGGCTGCATTTATGAT 50
||||||||||||||||.|.||||||||||||||||||||||..|||||||
RBAM_023290__ 1 ATGAAAAAAAACAAATGGATGCTTATGCTTCTGATGGCTGCTGTTATGAT 50
BSNT_03731___ 51 GATTGCAGCTGCATGCGGAAATGCAGGAGAAAGTAAA-----AAATCGAA 95
..||||.||.|||||||||||||| ||||.||| ||..|..|
RBAM_023290__ 51 TGTTGCTGCAGCATGCGGAAATGC-----AAAGGAAAGCGGCAAGACAGA 95
BSNT_03731___ 96 TAGCGATTCTGCAA--AAGGAGAAGAAAAGGCATCAGGTTCTTTAACCAT 143
.||..|.||||||| .||||.| ||||.||||||||||||||||||||
RBAM_023290__ 96 CAGTCAATCTGCAAGTGAGGATA--AAAAAGCATCAGGTTCTTTAACCAT 143
BSNT_03731___ 144 TTCTGGTTCATCGGCAATGCAGCCACTAGTACTTGCAGCCGCGGAAAAAT 193
||||||||||||.||.||||||||..|||||||.|||||.||||||||.|
RBAM_023290__ 144 TTCTGGTTCATCAGCCATGCAGCCGTTAGTACTGGCAGCGGCGGAAAAGT 193
BSNT_03731___ 194 TTATGGAAGAAAACCCTGATGCTGATATACAGGTACAAGCTGGCGGTTCT 243
||||||||.||.|.||.|||||||||.|.|||||.|||||.||.|||||.
RBAM_023290__ 194 TTATGGAAAAACATCCGGATGCTGATGTGCAGGTGCAAGCGGGAGGTTCA 243
BSNT_03731___ 244 GGAACAGGGCTTTCTCAAGTCTCTGAAGGAGCTGTTCAGATCGGGAATTC 293
||||||||.|||||.|||||.||||||||.||.||.||.|||||.||.||
RBAM_023290__ 244 GGAACAGGTCTTTCGCAAGTGTCTGAAGGGGCAGTGCAAATCGGCAACTC 293
BSNT_03731___ 294 AGACGTTTTTGCAGAAGAAAAAGAAGGCATCGATGCAAAAGCGCTTGTCG 343
|||.||.|||||.|||||||||||||||||.|||||||||||.||....|
RBAM_023290__ 294 AGATGTCTTTGCTGAAGAAAAAGAAGGCATTGATGCAAAAGCCCTAAAAG 343
BSNT_03731___ 344 ATCATCAAGTCGCTGTAGTTGGTATGGCAGCAGCTGTAAACCCTGATGCT 393
|.||.|.|||.||.|||||.|..|||||.||.||.||.|||||.|.|||.
RBAM_023290__ 344 ACCACCGAGTAGCGGTAGTGGCGATGGCGGCTGCGGTCAACCCCGGTGCG 393
BSNT_03731___ 394 GGTGTGAAGGATATTTCAAAAGATGAATTGAAAAAAATCTTCACTGGCAA 443
|||||.||||||||..|.|||.|..|..|||.|.|..||||.||.|||||
RBAM_023290__ 394 GGTGTAAAGGATATAACCAAAAAACAGCTGACAGACGTCTTTACAGGCAA 443
BSNT_03731___ 444 AATTAAAAACTGGAAAGAGCTCGGCGGCAAAGACCAAAAGATTACACTTG 493
|||||||||||||||||||||.|||||.|||||.|||||.||||||||||
RBAM_023290__ 444 AATTAAAAACTGGAAAGAGCTTGGCGGTAAAGATCAAAAAATTACACTTG 493
BSNT_03731___ 494 TAAACCGTCCTGATTCTTCTGGCACACGTGCTACATTTGTGAAATATGCG 543
|.||||||||||||||.||.||.|||||.|||||.||.||.|||||||||
RBAM_023290__ 494 TGAACCGTCCTGATTCATCAGGAACACGCGCTACGTTCGTCAAATATGCG 543
BSNT_03731___ 544 CTTGACGGAGAAGAACCTGCAGAAGGCATTACTGAAGATTCCTCCAACAC 593
||||||||||.|||.||||||||.|||||.||.||.|||||||||||.||
RBAM_023290__ 544 CTTGACGGAGCAGAGCCTGCAGAGGGCATCACAGAGGATTCCTCCAATAC 593
BSNT_03731___ 594 GGTGAAAAAAATCATTGCTGATACTCCGGGAGCGATTGGATATCTTGCAT 643
.||.||||||||||||||.||.||.||||||||.||.||.|||||.||||
RBAM_023290__ 594 AGTCAAAAAAATCATTGCGGAAACGCCGGGAGCAATCGGTTATCTGGCAT 643
BSNT_03731___ 644 TCTCATATTTAACAGATGACAAAGTAACTGCTCTATCTATTGACGGTGTT 693
||||.|||.|||..||||||||||||||..||.||||.||.|..||..|.
RBAM_023290__ 644 TCTCTTATATAAACGATGACAAAGTAACGCCTTTATCGATCGGAGGCATC 693
BSNT_03731___ 694 AAACCTGAAGCGAAAAATGTAGCAACTGGCGAGTATCCGATCTGGGCTTA 743
|||||.||||.||||||.||.|..||.||||||||||||||.||||||||
RBAM_023290__ 694 AAACCGGAAGAGAAAAACGTCGTCACAGGCGAGTATCCGATTTGGGCTTA 743
BSNT_03731___ 744 TCAGCATTCTTATACAAAAGGTGAAGCGACAGG-TTTAGCTAAAGAATTT 792
..||||.||||||||.||||||||||||.|||| .||| |.|||...|||
RBAM_023290__ 744 CGAGCACTCTTATACGAAAGGTGAAGCGTCAGGCCTTA-CAAAAACGTTT 792
BSNT_03731___ 793 CTTGATTATCTAAAGAGTGAAGACATTCAAAAAAGCATTGTTACTGACCA 842
|||||.|||.|.||.||.||.||..|.||.|||||.||.||.|..||.||
RBAM_023290__ 793 CTTGACTATATGAACAGCGATGAAGTACAGAAAAGTATCGTAAAAGATCA 842
BSNT_03731___ 843 AGGCTACATTCCGGTTACTGATATGAAAGTGACACGCGATGCCAACGGGA 892
|||||||||||||.|..|||||||||||||.|||||.||.||.|||||.|
RBAM_023290__ 843 AGGCTACATTCCGATCTCTGATATGAAAGTCACACGTGACGCAAACGGCA 892
BSNT_03731___ 893 AGCAAAGCTGA 903
|||||||||||
RBAM_023290__ 893 AGCAAAGCTGA 903
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