Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03729 and RBAM_023270

See DNA alignment / Visit BSNT_03729 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:00
# Commandline: needle
#    -asequence pep-align/BSNT_03729___pstA.1.9828.seq
#    -bsequence pep-align/RBAM_023270___pstA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03729___pstA-RBAM_023270___pstA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03729___pstA-RBAM_023270___pstA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03729___pstA
# 2: RBAM_023270___pstA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 294
# Identity:     260/294 (88.4%)
# Similarity:   284/294 (96.6%)
# Gaps:           0/294 ( 0.0%)
# Score: 1343.0
# 
#
#=======================================

BSNT_03729___      1 MNRKITDKLATGMFGLCAAIIAAILVGLFSYIIINGVSQLSFQFITTKSS     50
                     ||||||||||||:||||||:|||||.|||.||:|:|||::|..|:|:|||
RBAM_023270__      1 MNRKITDKLATGVFGLCAAVIAAILAGLFLYILIHGVSEISLHFLTSKSS     50

BSNT_03729___     51 AIAAGGGIRDQLFNSFYILFITMLITIPLGVGGGVFMAEYAPNNKVTDFI    100
                     |||:||||||||||||||||||||||||||||||||||||||.|::||||
RBAM_023270__     51 AIASGGGIRDQLFNSFYILFITMLITIPLGVGGGVFMAEYAPQNRITDFI    100

BSNT_03729___    101 RTCIEVLSSLPSIVIGMFGLLMFVNLTGWGYTIIGGALALTVFNLPVMVR    150
                     |||||||||||||||||||:||||||||||||||||||||||||||||||
RBAM_023270__    101 RTCIEVLSSLPSIVIGMFGMLMFVNLTGWGYTIIGGALALTVFNLPVMVR    150

BSNT_03729___    151 VTEDAIRSVPKDLKEASLALGVSRWHTVKTVLIPSAIPSIITGAILASGR    200
                     |||.|:.:|||:||||||||||||||||||||:|||||||:|||||||||
RBAM_023270__    151 VTEGALTAVPKELKEASLALGVSRWHTVKTVLVPSAIPSILTGAILASGR    200

BSNT_03729___    201 VFGEAAALLFTAGLTTPRLNFTEWNPFSETSPLNIFRPAETLAVHIWNVN    250
                     ||||||||||||||||||||||:.|||||:||.||||||||||||||:||
RBAM_023270__    201 VFGEAAALLFTAGLTTPRLNFTDLNPFSESSPFNIFRPAETLAVHIWSVN    250

BSNT_03729___    251 TQGMIPDAEAIANGGSAVLVISVLVFNLAARWLGTMIYKKLTAN    294
                     |||:||||||||||||||||||||:|||.|||||::||||||||
RBAM_023270__    251 TQGIIPDAEAIANGGSAVLVISVLLFNLCARWLGSVIYKKLTAN    294


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