Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03729 and RBAM_023270
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:00
# Commandline: needle
# -asequence dna-align/BSNT_03729___pstA.1.9828.seq
# -bsequence dna-align/RBAM_023270___pstA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03729___pstA-RBAM_023270___pstA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03729___pstA-RBAM_023270___pstA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03729___pstA
# 2: RBAM_023270___pstA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 885
# Identity: 695/885 (78.5%)
# Similarity: 695/885 (78.5%)
# Gaps: 0/885 ( 0.0%)
# Score: 2715.0
#
#
#=======================================
BSNT_03729___ 1 ATGAACCGCAAAATAACAGATAAACTGGCGACCGGAATGTTTGGTTTGTG 50
||||||||.||||||||.||||||.||||.|||||..|.||.||.||.||
RBAM_023270__ 1 ATGAACCGGAAAATAACGGATAAATTGGCCACCGGTGTATTCGGGTTATG 50
BSNT_03729___ 51 TGCAGCCATTATCGCTGCCATTTTAGTAGGTTTGTTTTCCTATATTATTA 100
.||.||..|.|||||.||.|||||.|.|||.|||||||..||.|||.|||
RBAM_023270__ 51 CGCCGCTGTAATCGCGGCGATTTTGGCAGGATTGTTTTTGTACATTCTTA 100
BSNT_03729___ 101 TAAACGGTGTTTCTCAGCTCAGTTTTCAATTTATTACAACAAAATCGAGC 150
|..||||.||.|||.|..||...||.||.|||.||||..|||||||||||
RBAM_023270__ 101 TTCACGGCGTCTCTGAAATCTCCTTGCATTTTCTTACGTCAAAATCGAGC 150
BSNT_03729___ 151 GCCATTGCAGCTGGAGGAGGCATACGAGATCAGCTGTTTAACTCCTTTTA 200
||||||||..|.||.||.||.|||||.||||||||.||||||||||||||
RBAM_023270__ 151 GCCATTGCGTCAGGCGGCGGAATACGGGATCAGCTTTTTAACTCCTTTTA 200
BSNT_03729___ 201 TATTTTGTTTATTACAATGCTGATTACAATCCCGCTCGGTGTGGGCGGCG 250
.|||.|||||||.||.||||||||.||.||.|||||.||.|||||.||||
RBAM_023270__ 201 CATTCTGTTTATCACCATGCTGATCACGATACCGCTTGGAGTGGGGGGCG 250
BSNT_03729___ 251 GAGTCTTCATGGCTGAATACGCGCCTAATAACAAAGTAACTGACTTCATC 300
|.|||||.|||||||||||.|||||..|.||.|.|.|.|||||.||.|||
RBAM_023270__ 251 GGGTCTTTATGGCTGAATATGCGCCCCAAAATAGAATCACTGATTTTATC 300
BSNT_03729___ 301 AGAACATGTATAGAGGTGCTTTCATCTCTTCCGTCTATTGTCATTGGGAT 350
|||||.|||||.||||||||.||.||.|||||.||.||||||||.|||||
RBAM_023270__ 301 AGAACGTGTATTGAGGTGCTGTCTTCGCTTCCATCCATTGTCATCGGGAT 350
BSNT_03729___ 351 GTTTGGATTATTGATGTTTGTCAACTTAACAGGCTGGGGATATACGATCA 400
|||.||..|..||||||||||.|||.|.||.||.|||||.||.|||||.|
RBAM_023270__ 351 GTTCGGCATGCTGATGTTTGTAAACCTGACCGGATGGGGCTACACGATTA 400
BSNT_03729___ 401 TAGGCGGGGCGCTTGCGTTAACTGTTTTTAACCTTCCTGTCATGGTGCGT 450
|.||.||.|||||.||.|||||.||.|||||||||||.||.|||||.||.
RBAM_023270__ 401 TCGGAGGCGCGCTCGCATTAACGGTCTTTAACCTTCCCGTTATGGTCCGG 450
BSNT_03729___ 451 GTGACAGAAGACGCGATCCGTTCAGTCCCTAAAGATCTGAAGGAAGCCTC 500
||||||||||.||||.||..|.||||.|||||.||.|||||.|||||.||
RBAM_023270__ 451 GTGACAGAAGGCGCGCTCACTGCAGTTCCTAAGGAGCTGAAAGAAGCTTC 500
BSNT_03729___ 501 TCTCGCTTTAGGTGTATCACGCTGGCATACCGTAAAAACGGTTTTAATTC 550
||||||||||||.|||||..|.|||||||||||.||||||||..|..|||
RBAM_023270__ 501 TCTCGCTTTAGGCGTATCGAGATGGCATACCGTCAAAACGGTGCTGGTTC 550
BSNT_03729___ 551 CAAGTGCGATTCCTTCTATTATCACAGGAGCAATTTTAGCGTCAGGAAGG 600
|.||||||||||||||.|||.|.||.|||||.|||.|.||.||||||||.
RBAM_023270__ 551 CGAGTGCGATTCCTTCGATTTTAACCGGAGCCATTCTCGCATCAGGAAGA 600
BSNT_03729___ 601 GTGTTCGGGGAAGCGGCCGCATTATTATTTACGGCAGGCCTGACAACACC 650
||.|||||.||||||||||||||.||||||||.||.||.||||||||.||
RBAM_023270__ 601 GTATTCGGAGAAGCGGCCGCATTGTTATTTACAGCGGGACTGACAACGCC 650
BSNT_03729___ 651 GCGTCTTAATTTTACGGAGTGGAACCCGTTTTCGGAAACATCACCGCTTA 700
|||.||.|||||||||||.|.||||||||||||.|||.||||.||..|.|
RBAM_023270__ 651 GCGGCTGAATTTTACGGATTTGAACCCGTTTTCTGAATCATCTCCTTTCA 700
BSNT_03729___ 701 ATATTTTCAGGCCCGCTGAAACACTTGCGGTCCACATTTGGAACGTCAAT 750
|.|||||||||||.|||||.||.||.|||||.||.||.||||..||||||
RBAM_023270__ 701 ACATTTTCAGGCCGGCTGAGACGCTGGCGGTTCATATATGGAGTGTCAAT 750
BSNT_03729___ 751 ACACAAGGAATGATTCCGGATGCTGAAGCGATTGCCAACGGTGGTTCTGC 800
||.||.|||||.||.||.||.||.|||||||||||.|||||.||.||.||
RBAM_023270__ 751 ACGCAGGGAATCATCCCTGACGCCGAAGCGATTGCAAACGGCGGCTCGGC 800
BSNT_03729___ 801 CGTGCTGGTGATTTCTGTTCTTGTGTTTAATCTCGCAGCGAGATGGCTTG 850
.||||||||||||||.||.||..|||||||.||....||.||||||||.|
RBAM_023270__ 801 GGTGCTGGTGATTTCGGTGCTCTTGTTTAACCTTTGTGCAAGATGGCTCG 850
BSNT_03729___ 851 GCACGATGATCTACAAGAAGCTTACGGCAAATTAG 885
|..|..|.||.||.||.||.||||||||||||||.
RBAM_023270__ 851 GATCTGTCATTTATAAAAAACTTACGGCAAATTAA 885
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