Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03729 and RBAM_023270

See Amino acid alignment / Visit BSNT_03729 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:00
# Commandline: needle
#    -asequence dna-align/BSNT_03729___pstA.1.9828.seq
#    -bsequence dna-align/RBAM_023270___pstA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03729___pstA-RBAM_023270___pstA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03729___pstA-RBAM_023270___pstA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03729___pstA
# 2: RBAM_023270___pstA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 885
# Identity:     695/885 (78.5%)
# Similarity:   695/885 (78.5%)
# Gaps:           0/885 ( 0.0%)
# Score: 2715.0
# 
#
#=======================================

BSNT_03729___      1 ATGAACCGCAAAATAACAGATAAACTGGCGACCGGAATGTTTGGTTTGTG     50
                     ||||||||.||||||||.||||||.||||.|||||..|.||.||.||.||
RBAM_023270__      1 ATGAACCGGAAAATAACGGATAAATTGGCCACCGGTGTATTCGGGTTATG     50

BSNT_03729___     51 TGCAGCCATTATCGCTGCCATTTTAGTAGGTTTGTTTTCCTATATTATTA    100
                     .||.||..|.|||||.||.|||||.|.|||.|||||||..||.|||.|||
RBAM_023270__     51 CGCCGCTGTAATCGCGGCGATTTTGGCAGGATTGTTTTTGTACATTCTTA    100

BSNT_03729___    101 TAAACGGTGTTTCTCAGCTCAGTTTTCAATTTATTACAACAAAATCGAGC    150
                     |..||||.||.|||.|..||...||.||.|||.||||..|||||||||||
RBAM_023270__    101 TTCACGGCGTCTCTGAAATCTCCTTGCATTTTCTTACGTCAAAATCGAGC    150

BSNT_03729___    151 GCCATTGCAGCTGGAGGAGGCATACGAGATCAGCTGTTTAACTCCTTTTA    200
                     ||||||||..|.||.||.||.|||||.||||||||.||||||||||||||
RBAM_023270__    151 GCCATTGCGTCAGGCGGCGGAATACGGGATCAGCTTTTTAACTCCTTTTA    200

BSNT_03729___    201 TATTTTGTTTATTACAATGCTGATTACAATCCCGCTCGGTGTGGGCGGCG    250
                     .|||.|||||||.||.||||||||.||.||.|||||.||.|||||.||||
RBAM_023270__    201 CATTCTGTTTATCACCATGCTGATCACGATACCGCTTGGAGTGGGGGGCG    250

BSNT_03729___    251 GAGTCTTCATGGCTGAATACGCGCCTAATAACAAAGTAACTGACTTCATC    300
                     |.|||||.|||||||||||.|||||..|.||.|.|.|.|||||.||.|||
RBAM_023270__    251 GGGTCTTTATGGCTGAATATGCGCCCCAAAATAGAATCACTGATTTTATC    300

BSNT_03729___    301 AGAACATGTATAGAGGTGCTTTCATCTCTTCCGTCTATTGTCATTGGGAT    350
                     |||||.|||||.||||||||.||.||.|||||.||.||||||||.|||||
RBAM_023270__    301 AGAACGTGTATTGAGGTGCTGTCTTCGCTTCCATCCATTGTCATCGGGAT    350

BSNT_03729___    351 GTTTGGATTATTGATGTTTGTCAACTTAACAGGCTGGGGATATACGATCA    400
                     |||.||..|..||||||||||.|||.|.||.||.|||||.||.|||||.|
RBAM_023270__    351 GTTCGGCATGCTGATGTTTGTAAACCTGACCGGATGGGGCTACACGATTA    400

BSNT_03729___    401 TAGGCGGGGCGCTTGCGTTAACTGTTTTTAACCTTCCTGTCATGGTGCGT    450
                     |.||.||.|||||.||.|||||.||.|||||||||||.||.|||||.||.
RBAM_023270__    401 TCGGAGGCGCGCTCGCATTAACGGTCTTTAACCTTCCCGTTATGGTCCGG    450

BSNT_03729___    451 GTGACAGAAGACGCGATCCGTTCAGTCCCTAAAGATCTGAAGGAAGCCTC    500
                     ||||||||||.||||.||..|.||||.|||||.||.|||||.|||||.||
RBAM_023270__    451 GTGACAGAAGGCGCGCTCACTGCAGTTCCTAAGGAGCTGAAAGAAGCTTC    500

BSNT_03729___    501 TCTCGCTTTAGGTGTATCACGCTGGCATACCGTAAAAACGGTTTTAATTC    550
                     ||||||||||||.|||||..|.|||||||||||.||||||||..|..|||
RBAM_023270__    501 TCTCGCTTTAGGCGTATCGAGATGGCATACCGTCAAAACGGTGCTGGTTC    550

BSNT_03729___    551 CAAGTGCGATTCCTTCTATTATCACAGGAGCAATTTTAGCGTCAGGAAGG    600
                     |.||||||||||||||.|||.|.||.|||||.|||.|.||.||||||||.
RBAM_023270__    551 CGAGTGCGATTCCTTCGATTTTAACCGGAGCCATTCTCGCATCAGGAAGA    600

BSNT_03729___    601 GTGTTCGGGGAAGCGGCCGCATTATTATTTACGGCAGGCCTGACAACACC    650
                     ||.|||||.||||||||||||||.||||||||.||.||.||||||||.||
RBAM_023270__    601 GTATTCGGAGAAGCGGCCGCATTGTTATTTACAGCGGGACTGACAACGCC    650

BSNT_03729___    651 GCGTCTTAATTTTACGGAGTGGAACCCGTTTTCGGAAACATCACCGCTTA    700
                     |||.||.|||||||||||.|.||||||||||||.|||.||||.||..|.|
RBAM_023270__    651 GCGGCTGAATTTTACGGATTTGAACCCGTTTTCTGAATCATCTCCTTTCA    700

BSNT_03729___    701 ATATTTTCAGGCCCGCTGAAACACTTGCGGTCCACATTTGGAACGTCAAT    750
                     |.|||||||||||.|||||.||.||.|||||.||.||.||||..||||||
RBAM_023270__    701 ACATTTTCAGGCCGGCTGAGACGCTGGCGGTTCATATATGGAGTGTCAAT    750

BSNT_03729___    751 ACACAAGGAATGATTCCGGATGCTGAAGCGATTGCCAACGGTGGTTCTGC    800
                     ||.||.|||||.||.||.||.||.|||||||||||.|||||.||.||.||
RBAM_023270__    751 ACGCAGGGAATCATCCCTGACGCCGAAGCGATTGCAAACGGCGGCTCGGC    800

BSNT_03729___    801 CGTGCTGGTGATTTCTGTTCTTGTGTTTAATCTCGCAGCGAGATGGCTTG    850
                     .||||||||||||||.||.||..|||||||.||....||.||||||||.|
RBAM_023270__    801 GGTGCTGGTGATTTCGGTGCTCTTGTTTAACCTTTGTGCAAGATGGCTCG    850

BSNT_03729___    851 GCACGATGATCTACAAGAAGCTTACGGCAAATTAG    885
                     |..|..|.||.||.||.||.||||||||||||||.
RBAM_023270__    851 GATCTGTCATTTATAAAAAACTTACGGCAAATTAA    885


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