Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03727 and RBAM_023260

See DNA alignment / Visit BSNT_03727 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:00
# Commandline: needle
#    -asequence pep-align/BSNT_03727___pstBA.1.9828.seq
#    -bsequence pep-align/RBAM_023260___pstBA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03727___pstBA-RBAM_023260___pstBA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03727___pstBA-RBAM_023260___pstBA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03727___pstBA
# 2: RBAM_023260___pstBA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 290
# Identity:     226/290 (77.9%)
# Similarity:   245/290 (84.5%)
# Gaps:          22/290 ( 7.6%)
# Score: 1132.0
# 
#
#=======================================

BSNT_03727___      1 MAWHDDLQEAYGKLERKEAKNMSEQMVKEKPERAVIVPKQNHVLEVKDLS     50
                                          |.:.:::|:.|:....| ::.:||||.||
RBAM_023260__      1 ---------------------MIDHIIREQAEQTKRSP-ESSILEVKHLS     28

BSNT_03727___     51 IFYGNKQAVHHVNMDIEKNAVTALIGPSGCGKSTFLRNINRMNDLIPSAR    100
                     |:||:||||..|||||||:||||||||||||||||||.||||||.||.||
RBAM_023260__     29 IYYGDKQAVKDVNMDIEKHAVTALIGPSGCGKSTFLRQINRMNDAIPFAR     78

BSNT_03727___    101 AEGEILYEGLNILGGNINVVSLRREIGMVFQKPNPFPKSIYANITHALKY    150
                     :|||||||||||||..|||||||||||||||||||||||||.||||||||
RBAM_023260__     79 SEGEILYEGLNILGEAINVVSLRREIGMVFQKPNPFPKSIYNNITHALKY    128

BSNT_03727___    151 AGERNKAVLDGIVEESLTKAALWDEVKDRLHSSALSLSGGQQQRLCIART    200
                     ||||.|||||..||||||||||||||||||||||||||||||||||||||
RBAM_023260__    129 AGERRKAVLDDAVEESLTKAALWDEVKDRLHSSALSLSGGQQQRLCIART    178

BSNT_03727___    201 LAMKPAVLLLDEPASALDPISNAKIEELITGLKREYSIIIVTHNMQQALR    250
                     |||||||||||||||||||||||:||.|:|.||::|||||||||||||||
RBAM_023260__    179 LAMKPAVLLLDEPASALDPISNARIEALLTELKKDYSIIIVTHNMQQALR    228

BSNT_03727___    251 VSDRTAFFLNGELVEYGQTEQIFTSPKKQKTEDYINGKFG    290
                     ||||||||||||:||||||||||||||.|||:||||||||
RBAM_023260__    229 VSDRTAFFLNGEVVEYGQTEQIFTSPKAQKTDDYINGKFG    268


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