Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03727 and RBAM_023260

See Amino acid alignment / Visit BSNT_03727 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:00
# Commandline: needle
#    -asequence dna-align/BSNT_03727___pstBA.1.9828.seq
#    -bsequence dna-align/RBAM_023260___pstBA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03727___pstBA-RBAM_023260___pstBA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03727___pstBA-RBAM_023260___pstBA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03727___pstBA
# 2: RBAM_023260___pstBA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 894
# Identity:     619/894 (69.2%)
# Similarity:   619/894 (69.2%)
# Gaps:         108/894 (12.1%)
# Score: 2262.0
# 
#
#=======================================

BSNT_03727___      1 ATGGCTTGGCACGATGATCTACAAGAAGCTTACGGCAAATTAGAACGGAA     50
                                                                       
RBAM_023260__      0 --------------------------------------------------      0

BSNT_03727___     51 AGAGGCGAAAAACATGTCTGAACAAATGGTAAAAGAAAAACCTGAGC---     97
                                  |||..|||.||.||..|.|..|||.||.|.||.|   
RBAM_023260__      1 -------------ATGATTGATCACATCATCAGGGAACAAGCGGAACAGA     37

BSNT_03727___     98 --GAGCTGTTATTGTTCCGAAGCAGAACCACGTGCTT--------GAGGT    137
                       .|||       ||||    ||.|.|    || |||        ||.||
RBAM_023260__     38 CAAAGC-------GTTC----GCCGGA----GT-CTTCAATTTTGGAAGT     71

BSNT_03727___    138 CAAAGATCTGTCTATTTTTTACGGAAATAAACAAGCCGTTCATCATGTAA    187
                     .||..||.|.||.||||.||||||..|.||||||||.|||.|..||||||
RBAM_023260__     72 GAAGCATTTATCAATTTATTACGGTGACAAACAAGCGGTTAAAGATGTAA    121

BSNT_03727___    188 ACATGGATATTGAAAAAAATGCGGTGACTGCTTTAATTGGGCCGTCGGGA    237
                     |||||||||||||||||.||||||||||.|||.|.||.||.|||||.||.
RBAM_023260__    122 ACATGGATATTGAAAAACATGCGGTGACGGCTCTGATCGGTCCGTCCGGC    171

BSNT_03727___    238 TGCGGAAAATCTACTTTTTTGAGAAATATTAACCGAATGAACGATTTAAT    287
                     |||||.|||||.||.|||||||||.|.||||||.|||||||||||...||
RBAM_023260__    172 TGCGGGAAATCAACATTTTTGAGACAGATTAACAGAATGAACGATGCCAT    221

BSNT_03727___    288 TCCATCTGCAAG-AGCGGAAGGTGAAATCCTTTATGAAGGATTAAATATA    336
                     .||.|.|||||| ||| ||.||.||.||||||||||||||..|.|||||.
RBAM_023260__    222 CCCTTTTGCAAGAAGC-GAGGGAGAGATCCTTTATGAAGGGCTGAATATT    270

BSNT_03727___    337 TTGGGCGGCAA--TATTAACGT--TGTCAGCT-TGAGAAGAGAAATCGGA    381
                     ||||  ||.||  .|||||.||  |||   || |.|||.|.||.|||||.
RBAM_023260__    271 TTGG--GGGAAGCGATTAATGTCGTGT---CTCTCAGACGGGAGATCGGT    315

BSNT_03727___    382 ATGGTTTTCCAAAAACCAAATCCATTTCCGAAATCGATCTATGCGAATAT    431
                     |||||.||.||||||||.||||||||.||||||||.||.||....||.||
RBAM_023260__    316 ATGGTGTTTCAAAAACCGAATCCATTCCCGAAATCCATTTACAATAACAT    365

BSNT_03727___    432 CACACATGCATTGAAATATGCCGGAGAGCGGAATAAAGCTGTTTTAGATG    481
                     |||||||||..||||.|||||.||.||.||.|..|||||.|||||.||||
RBAM_023260__    366 CACACATGCGCTGAAGTATGCGGGTGAACGCAGGAAAGCCGTTTTGGATG    415

BSNT_03727___    482 GAAT--TGTGGAAGAAAGTTTAACAAAAGCGGCTCTCTGGGATGAGGTGA    529
                       ||  .||.||.|||||.|||||.||.|||||.||.||||||||.||.|
RBAM_023260__    416 --ATGCGGTCGAGGAAAGCTTAACGAAGGCGGCGCTTTGGGATGAAGTTA    463

BSNT_03727___    530 AGGATCGTTTACATTCATCCGCACTCTCGTTATCCGGCGGCCAGCAGCAG    579
                     |.||.||..|.||||||||.||.||.||||||||.|||||||||||||||
RBAM_023260__    464 AAGACCGGCTTCATTCATCGGCTCTTTCGTTATCAGGCGGCCAGCAGCAG    513

BSNT_03727___    580 CGTTTATGCATCGCGAGAACGCTTGCGATGAAGCCGGCTGTTCTTCTGCT    629
                     |||.|.||||||||..|.||||||||||||||.||.||.||.|||||..|
RBAM_023260__    514 CGTCTTTGCATCGCCCGTACGCTTGCGATGAAACCTGCCGTACTTCTTTT    563

BSNT_03727___    630 TGATGAACCAGCTTCAGCGCTTGATCCGATTTCAAATGCGAAAATAGAGG    679
                     .||||||||.||.|||||.||.||.||.||||||||.||.|.|||.||||
RBAM_023260__    564 AGATGAACCGGCCTCAGCTCTGGACCCTATTTCAAACGCCAGAATCGAGG    613

BSNT_03727___    680 AATTAATTACAGGATTGAAAAGAGAATACTCAATTATTATTGTCACGCAC    729
                     ...|..|.||||.|.||||||.|||.||.||.||||||||.||.|||||.
RBAM_023260__    614 CGCTTTTGACAGAACTGAAAAAAGATTATTCGATTATTATCGTTACGCAT    663

BSNT_03727___    730 AATATGCAGCAGGCTCTGCGGGTTTCTGACCGGACGGCATTCTTTTTAAA    779
                     ||.|||||||||||.|||.||||.||||||||.|||||.|||||||||||
RBAM_023260__    664 AACATGCAGCAGGCGCTGAGGGTGTCTGACCGAACGGCTTTCTTTTTAAA    713

BSNT_03727___    780 CGGCGAGCTTGTAGAATACGGACAGACCGAACAGATTTTCACGAGTCCGA    829
                     |||.||..|.||.||||||||.|||||.|||||.||||||||||||||.|
RBAM_023260__    714 CGGGGAAGTGGTGGAATACGGGCAGACAGAACAAATTTTCACGAGTCCTA    763

BSNT_03727___    830 AAAAGCAAAAGACAGAGGATTATATTAATGGGAAATTCGGATAG    873
                     ||..||||||||||||.||.||.|||||.||.||.|||||||||
RBAM_023260__    764 AAGCGCAAAAGACAGATGACTACATTAACGGAAAGTTCGGATAG    807


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03727 and RBAM_023260

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
