Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03724 and RBAM_023240

See DNA alignment / Visit BSNT_03724 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:00
# Commandline: needle
#    -asequence pep-align/BSNT_03724___yqzC.1.9828.seq
#    -bsequence pep-align/RBAM_023240___yqzC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03724___yqzC-RBAM_023240___yqzC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03724___yqzC-RBAM_023240___yqzC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03724___yqzC
# 2: RBAM_023240___yqzC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 155
# Identity:     125/155 (80.6%)
# Similarity:   138/155 (89.0%)
# Gaps:           2/155 ( 1.3%)
# Score: 604.0
# 
#
#=======================================

BSNT_03724___      1 MTKRGIQAFAGGIILATAVLAAVFYLTDEDQAAAVKDNKT-VTEQDVNNY     49
                     ||||||||||.|:|||||||||||||||.|||||||..|| :||::||:|
RBAM_023240__      1 MTKRGIQAFAAGMILATAVLAAVFYLTDHDQAAAVKTEKTALTEKEVNSY     50

BSNT_03724___     50 LDSKKMVSVNRDEYQKLLDSKEKSLTDDSSSDTKTDKVKTYKLKIKDGMS     99
                     ||.::.||||||:||||||||||||.:|.::|.|..|| ||||.||||||
RBAM_023240__     51 LDDQQKVSVNRDDYQKLLDSKEKSLNNDQNTDAKKKKV-TYKLTIKDGMS     99

BSNT_03724___    100 TADVSAILEKEGIISSAQDFNDYVIDAGYHKEIRAGEFKVKSDMSFKKIV    149
                     |||||:||||||||.||:||||||||||||||||||.|||.|||||||||
RBAM_023240__    100 TADVSSILEKEGIIPSAKDFNDYVIDAGYHKEIRAGHFKVDSDMSFKKIV    149

BSNT_03724___    150 KTLTR    154
                     |||||
RBAM_023240__    150 KTLTR    154


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