Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03724 and RBAM_023240

See Amino acid alignment / Visit BSNT_03724 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:00
# Commandline: needle
#    -asequence dna-align/BSNT_03724___yqzC.1.9828.seq
#    -bsequence dna-align/RBAM_023240___yqzC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03724___yqzC-RBAM_023240___yqzC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03724___yqzC-RBAM_023240___yqzC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03724___yqzC
# 2: RBAM_023240___yqzC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 472
# Identity:     365/472 (77.3%)
# Similarity:   365/472 (77.3%)
# Gaps:          14/472 ( 3.0%)
# Score: 1370.0
# 
#
#=======================================

BSNT_03724___      1 ATGACAAAACGGGGCATTCAGGCATTTGCTGGCGGCATCATTTTAGCGAC     50
                     |||||||||||||||||||||||.|||||.|..|||||.|||||||||||
RBAM_023240__      1 ATGACAAAACGGGGCATTCAGGCTTTTGCAGCAGGCATGATTTTAGCGAC     50

BSNT_03724___     51 AGCCGTTCTTGCAGCTGTTTTTTATCTGACTGACGAAGACCAGGCCGCTG    100
                     .||||||||.||.|||||.||.|||.||||||||.|.||||||||.||.|
RBAM_023240__     51 GGCCGTTCTCGCCGCTGTCTTCTATTTGACTGACCATGACCAGGCAGCCG    100

BSNT_03724___    101 CTG-TAAAAGATAATAAAACAG---TAACTGAACAAGACGTGAACAATTA    146
                     |.| |||||...|| |||||||   |.||.|||.||||.||.||||..||
RBAM_023240__    101 CCGTTAAAACCGAA-AAAACAGCATTGACAGAAAAAGAAGTAAACAGCTA    149

BSNT_03724___    147 CCTTGA--TTCTAAAAAAATGGTTTCTGTGAACCGTGATGAATATCAAAA    194
                     |||.||  .||...|||||  ||.||.||.|||||.|||||.||||||||
RBAM_023240__    150 CCTCGACGATCAGCAAAAA--GTCTCCGTCAACCGGGATGACTATCAAAA    197

BSNT_03724___    195 ACTTCTTGATTCAAAAGAGAAATCGTTGACCGATGACAGCAGCTCAGACA    244
                     |||.||||||||.|||||.||||||||.|.|.|.|||...|.|.|||||.
RBAM_023240__    198 ACTGCTTGATTCTAAAGAAAAATCGTTAAACAACGACCAAAACACAGACG    247

BSNT_03724___    245 CGAAAACAG-ACAAAGTCAAAACGTACAAGCTCAAAATTAAAGATGGCAT    293
                     |.|||| || |.|||||   |||.|||||.||.|..||||||||.||.||
RBAM_023240__    248 CCAAAA-AGAAAAAAGT---AACATACAAACTGACGATTAAAGACGGAAT    293

BSNT_03724___    294 GAGCACTGCGGATGTATCTGCTATTCTTGAAAAAGAGGGCATTATCTCTT    343
                     |||||||||.|||||.||..|.||||||||||||||.||.|||||..|||
RBAM_023240__    294 GAGCACTGCTGATGTGTCATCCATTCTTGAAAAAGAAGGGATTATTCCTT    343

BSNT_03724___    344 CGGCTCAAGACTTTAATGACTATGTCATTGATGCCGGCTATCACAAAGAA    393
                     |.||..|.|||||||||||.||.||||||||.||.|||||.||.||||||
RBAM_023240__    344 CAGCGAAGGACTTTAATGATTACGTCATTGACGCAGGCTACCATAAAGAA    393

BSNT_03724___    394 ATTCGTGCCGGCGAGTTTAAAGTAAAATCAGACATGAGTTTCAAAAAGAT    443
                     ||.||.||||||.|.||.|||||..|.|||||.|||||.||.|||||.||
RBAM_023240__    394 ATCCGCGCCGGCCATTTCAAAGTCGACTCAGATATGAGCTTTAAAAAAAT    443

BSNT_03724___    444 CGTAAAAACGTTAACACGATAA    465
                     |||.|||||.|||||.||.|||
RBAM_023240__    444 CGTCAAAACATTAACCCGCTAA    465


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