Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03723 and RBAM_023230

See DNA alignment / Visit BSNT_03723 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:00
# Commandline: needle
#    -asequence pep-align/BSNT_03723___yqzD.1.9828.seq
#    -bsequence pep-align/RBAM_023230___yqzD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03723___yqzD-RBAM_023230___yqzD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03723___yqzD-RBAM_023230___yqzD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03723___yqzD
# 2: RBAM_023230___yqzD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 117
# Identity:     113/117 (96.6%)
# Similarity:   115/117 (98.3%)
# Gaps:           0/117 ( 0.0%)
# Score: 539.0
# 
#
#=======================================

BSNT_03723___      1 MEIAIIALFIVSIALIAFSYSQRDPMKDVEQELETLQLSAMQEIYKLKKK     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_023230__      1 MEIAIIALFIVSIALIAFSYSQRDPMKDVEQELETLQLSAMQEIYKLKKK     50

BSNT_03723___     51 MTVLEEELLETNLVIRKSKQSDINQKIAKQILSKYNNGMSAEAIAKAEHV    100
                     |||||||||||||||||:|.|.|||||||||:||||||||||||||||||
RBAM_023230__     51 MTVLEEELLETNLVIRKAKSSGINQKIAKQIISKYNNGMSAEAIAKAEHV    100

BSNT_03723___    101 SVEDVNTIIKDNEKVLV    117
                     |||||||||||||||||
RBAM_023230__    101 SVEDVNTIIKDNEKVLV    117


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