Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03723 and RBAM_023230
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:00
# Commandline: needle
# -asequence dna-align/BSNT_03723___yqzD.1.9828.seq
# -bsequence dna-align/RBAM_023230___yqzD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03723___yqzD-RBAM_023230___yqzD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03723___yqzD-RBAM_023230___yqzD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03723___yqzD
# 2: RBAM_023230___yqzD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 356
# Identity: 309/356 (86.8%)
# Similarity: 309/356 (86.8%)
# Gaps: 4/356 ( 1.1%)
# Score: 1352.0
#
#
#=======================================
BSNT_03723___ 1 GTGGAAATTGCTATTATTGCGTTGTTTATCGTCAGTATAGCGCTAATTGC 50
||||||||||||||||||||||||||||||||||||||||||||.|||||
RBAM_023230__ 1 GTGGAAATTGCTATTATTGCGTTGTTTATCGTCAGTATAGCGCTTATTGC 50
BSNT_03723___ 51 ATTCTCATATTCTCAAAGAGACCCGATGAAAGATGTAGAACAGGAACTCG 100
|||||||||||||||||||||.|||||||||||.||.||||||||.||.|
RBAM_023230__ 51 ATTCTCATATTCTCAAAGAGATCCGATGAAAGACGTGGAACAGGAGCTTG 100
BSNT_03723___ 101 AAACACTGCAGCTTTCTGCGATGCAGGAAATTTACAAGCTCAAAAAGAAA 150
||||.||.||||||||.||.||||||||||||||||||||.|||||||||
RBAM_023230__ 101 AAACGCTTCAGCTTTCCGCCATGCAGGAAATTTACAAGCTGAAAAAGAAA 150
BSNT_03723___ 151 ATGACAGTGCTTGAGGAAGAATTACTGGAAACAAACCTTGTCATTCGCAA 200
|||||.||||||||.||||||||.||||||||.|||||.||.||.|||||
RBAM_023230__ 151 ATGACGGTGCTTGAAGAAGAATTGCTGGAAACCAACCTCGTGATCCGCAA 200
BSNT_03723___ 201 ATC--AAAGCAGAGCGACATCAATCAAAAAATCGCTAAACAAATACTTTC 248
|.| ||||| ||||.|||.||.|||||||||||.||||||||..||||
RBAM_023230__ 201 AGCCAAAAGC--AGCGGCATTAACCAAAAAATCGCCAAACAAATCATTTC 248
BSNT_03723___ 249 TAAATATAATAACGGTATGTCAGCTGAAGCGATTGCTAAAGCTGAGCATG 298
.||||||||.|||||.|||||.||.|||||.||.||.|||||.|||||.|
RBAM_023230__ 249 AAAATATAACAACGGAATGTCTGCGGAAGCCATCGCAAAAGCGGAGCACG 298
BSNT_03723___ 299 TATCAGTGGAAGACGTGAATACGATTATCAAGGATAATGAGAAGGTGCTC 348
|.||.||.||.|||||.|||||.|||||.||.||||||||||||||||||
RBAM_023230__ 299 TGTCTGTCGAGGACGTCAATACCATTATTAAAGATAATGAGAAGGTGCTC 348
BSNT_03723___ 349 GTATGA 354
||||||
RBAM_023230__ 349 GTATGA 354
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