Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03718 and RBAM_023210
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:00
# Commandline: needle
# -asequence pep-align/BSNT_03718___yqgN.1.9828.seq
# -bsequence pep-align/RBAM_023210___yqgN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03718___yqgN-RBAM_023210___yqgN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03718___yqgN-RBAM_023210___yqgN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03718___yqgN
# 2: RBAM_023210___yqgN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 187
# Identity: 104/187 (55.6%)
# Similarity: 130/187 (69.5%)
# Gaps: 3/187 ( 1.6%)
# Score: 542.0
#
#
#=======================================
BSNT_03718___ 1 MKSQLRKKTLEALSALSNEDILQKTERMYKYLFSLPEWQNAGTIAVTISR 50
||:|:|......||.::..:..:|...|.:.||||.||:.|..||||||.
RBAM_023210__ 1 MKAQIRTAIKAKLSDMTESEWEKKCRSMRETLFSLKEWKQARVIAVTIST 50
BSNT_03718___ 51 GLEIPTRPVIEQAWEEGKQVCIPKCHPDTKKMQFRTYQTDDQLETVYAGL 100
.|||||:|:|||||:|.||||||||.|.|..|:|||:...||||||||||
RBAM_023210__ 51 RLEIPTQPIIEQAWKEKKQVCIPKCFPQTGAMEFRTFSAYDQLETVYAGL 100
BSNT_03718___ 101 LEPVIEKTKEVNPSQIDLMIVPGVCFDVNGFRVGFGGGYYDRYLSEYEGK 150
.||:...|::.....|||:|||||.||..|||:|:|||||||||..|:|:
RBAM_023210__ 101 SEPIESLTEKAAQKDIDLVIVPGVAFDREGFRIGYGGGYYDRYLPGYKGR 150
BSNT_03718___ 151 TVSLLLECQLYAHVPSLPHDIPVHKLVTEDRIISCFS 187
|||||.:|||...:|.:||||||..:|||...|:
RBAM_023210__ 151 TVSLLFDCQLTDRIPRMPHDIPVDMIVTESETIA--- 184
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