Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03703 and RBAM_023140

See DNA alignment / Visit BSNT_03703 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:59
# Commandline: needle
#    -asequence pep-align/BSNT_03703___yqgV.1.9828.seq
#    -bsequence pep-align/RBAM_023140___yqgV.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03703___yqgV-RBAM_023140___yqgV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03703___yqgV-RBAM_023140___yqgV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03703___yqgV
# 2: RBAM_023140___yqgV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 104
# Identity:      93/104 (89.4%)
# Similarity:    99/104 (95.2%)
# Gaps:           0/104 ( 0.0%)
# Score: 465.0
# 
#
#=======================================

BSNT_03703___      1 MAIADVTIIPIGTETPSVSAYVADVQKILEGYQAEGKIKYQLTPMNTLIE     50
                     |||||||||||||:|||||.||||||.|||||:|.||||:||||||||||
RBAM_023140__      1 MAIADVTIIPIGTKTPSVSEYVADVQNILEGYKAAGKIKFQLTPMNTLIE     50

BSNT_03703___     51 GELSDLFAVIQAIHEAPFQKGLHRVATNIRIDDRRDKKTTLESKIESVNK    100
                     |||||||||||.|||||||||||||||||||||||||:|||||||:||:|
RBAM_023140__     51 GELSDLFAVIQDIHEAPFQKGLHRVATNIRIDDRRDKETTLESKIKSVSK    100

BSNT_03703___    101 HLQP    104
                     |||.
RBAM_023140__    101 HLQQ    104


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