Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03703 and RBAM_023140

See Amino acid alignment / Visit BSNT_03703 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:59
# Commandline: needle
#    -asequence dna-align/BSNT_03703___yqgV.1.9828.seq
#    -bsequence dna-align/RBAM_023140___yqgV.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03703___yqgV-RBAM_023140___yqgV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03703___yqgV-RBAM_023140___yqgV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03703___yqgV
# 2: RBAM_023140___yqgV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 315
# Identity:     250/315 (79.4%)
# Similarity:   250/315 (79.4%)
# Gaps:           0/315 ( 0.0%)
# Score: 990.0
# 
#
#=======================================

BSNT_03703___      1 ATGGCTATCGCAGATGTAACCATTATCCCAATCGGTACGGAAACACCCAG     50
                     |||||.||.||||||||.||.||.||.||.|||||.||..|||||||.||
RBAM_023140__      1 ATGGCAATTGCAGATGTGACAATCATTCCGATCGGAACAAAAACACCGAG     50

BSNT_03703___     51 TGTCAGTGCTTACGTAGCCGATGTGCAAAAGATATTAGAAGGATATCAAG    100
                     .|||||||..||.|||||.|||||||||||.||.||.||.||.||..|||
RBAM_023140__     51 CGTCAGTGAGTATGTAGCGGATGTGCAAAACATTTTGGAGGGGTACAAAG    100

BSNT_03703___    101 CAGAAGGGAAAATCAAATATCAGCTGACACCGATGAATACGCTGATCGAG    150
                     |.|..||.||.|||||||.||||||.||.||||||||.||..||||.||.
RBAM_023140__    101 CTGCCGGCAAGATCAAATTTCAGCTCACGCCGATGAACACTTTGATTGAA    150

BSNT_03703___    151 GGAGAACTCAGTGACCTTTTTGCAGTCATTCAGGCAATTCACGAAGCGCC    200
                     ||.||.||.||.|||.|.||.|||||||||||||..|||||||||||.||
RBAM_023140__    151 GGTGAGCTGAGCGACTTATTCGCAGTCATTCAGGACATTCACGAAGCCCC    200

BSNT_03703___    201 ATTTCAAAAAGGATTGCACAGAGTGGCAACGAATATCCGTATCGATGACA    250
                     .||.||||||||..|||||||||||||.||.||||||||.||.|||||||
RBAM_023140__    201 GTTCCAAAAAGGGCTGCACAGAGTGGCGACAAATATCCGCATTGATGACA    250

BSNT_03703___    251 GGCGTGACAAAAAAACGACGCTTGAGAGCAAAATAGAAAGTGTCAATAAA    300
                     |.|||||.|||.|||||||.||.|||||||||||..|||||||||..|||
RBAM_023140__    251 GACGTGATAAAGAAACGACACTGGAGAGCAAAATCAAAAGTGTCAGCAAA    300

BSNT_03703___    301 CATTTACAGCCATAA    315
                     |||||.||||.||||
RBAM_023140__    301 CATTTGCAGCAATAA    315


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