Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03693 and RBAM_023070
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:58
# Commandline: needle
# -asequence pep-align/BSNT_03693___yqhB.1.9828.seq
# -bsequence pep-align/RBAM_023070___yqhB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03693___yqhB-RBAM_023070___yqhB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03693___yqhB-RBAM_023070___yqhB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03693___yqhB
# 2: RBAM_023070___yqhB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 442
# Identity: 308/442 (69.7%)
# Similarity: 374/442 (84.6%)
# Gaps: 9/442 ( 2.0%)
# Score: 1627.0
#
#
#=======================================
BSNT_03693___ 1 MPSLEKAVVLEFVNLLAVAILILLTGFFVAVEFSIVKVRRSKIDQLVAKG 50
:..:.|.|:.:.||||..|||:||||||.|||:|:||:.:.
RBAM_023070__ 1 ---------MYIIKLSAIVLFILLTACFVAIEFSIVKARRSRINQLIEED 41
BSNT_03693___ 51 KKGAKAAKHVITHLDEYLSACQLGITVAALGLGWLGEPTVQTLLRPLFHK 100
.||||||||||||||||||||||||||.|||:||||||||:.:|:|||.|
RBAM_023070__ 42 VKGAKAAKHVITHLDEYLSACQLGITVTALGIGWLGEPTVKAMLQPLFLK 91
BSNT_03693___ 101 AGLNESLTHLLSLVIAFLAVTYLNVVIGELAPKSFAIQKAESITLLFAKP 150
.|::|::..:|||:||||.|||:||||||||||||||||||.||||.|:|
RBAM_023070__ 92 TGVHEAVAQVLSLIIAFLLVTYVNVVIGELAPKSFAIQKAERITLLSARP 141
BSNT_03693___ 151 LIWFYKIMFPFIWLLNHSARLITGVFGLKPASEHELAYTEEELRVLLAES 200
:|.|||:||||||||||||||||.:||||||||||:||||||||||||||
RBAM_023070__ 142 MILFYKLMFPFIWLLNHSARLITAMFGLKPASEHEMAYTEEELRVLLAES 191
BSNT_03693___ 201 YKSGEIRKSELKYMNNIFTFDKRMAKEIMVPRNEMVSLSLDEDSISNLQE 250
|:||.|:||||.|:|||||||||.||||||||||||||.||..|...|::
RBAM_023070__ 192 YRSGMIKKSELHYVNNIFTFDKRTAKEIMVPRNEMVSLPLDSGSGHMLRD 241
BSNT_03693___ 251 TVKQTKYTRYPVVREDKDNVIGVINMKEVLFSMLTKDFSIKKHQIEPFVQ 300
.:|..||||||||:.|||:|:|:||:|||||..|::..:..||::.|::|
RBAM_023070__ 242 IIKTNKYTRYPVVKGDKDHVVGIINIKEVLFRFLSEGAAFTKHELSPYIQ 291
BSNT_03693___ 301 PVIHVIETIPIYKLLLKMQKERTHMAILIDEYGGTSGLVTVEDIIEEIVG 350
|.||||||||||:|.:|||:|..||||||||||||:||||.|||||||||
RBAM_023070__ 292 PAIHVIETIPIYQLFVKMQREHAHMAILIDEYGGTAGLVTAEDIIEEIVG 341
BSNT_03693___ 351 EIRDEFDADEVPHIRELGKDHYLLNAKLLISDVNSLLGTDLSEAEVDTLG 400
|||||||.||.|.:::|||:.|||||||||||||.:|||:::..:|||||
RBAM_023070__ 342 EIRDEFDTDETPSVQKLGKNRYLLNAKLLISDVNDVLGTEITADQVDTLG 391
BSNT_03693___ 401 GWFLTQNIDAEPESTIEYDGYSFKVKDINSHHILFIEVKKAE 442
||||||:|||:|.|||:::||:|.||:|:||||:.||.:|||
RBAM_023070__ 392 GWFLTQHIDAKPGSTIDFEGYTFTVKEIDSHHIITIEAEKAE 433
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