Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03693 and RBAM_023070
See
Amino acid alignment /
Visit
BSNT_03693 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:59
# Commandline: needle
# -asequence dna-align/BSNT_03693___yqhB.1.9828.seq
# -bsequence dna-align/RBAM_023070___yqhB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03693___yqhB-RBAM_023070___yqhB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03693___yqhB-RBAM_023070___yqhB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03693___yqhB
# 2: RBAM_023070___yqhB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1383
# Identity: 951/1383 (68.8%)
# Similarity: 951/1383 (68.8%)
# Gaps: 135/1383 ( 9.8%)
# Score: 3085.5
#
#
#=======================================
BSNT_03693___ 1 ATGCCTTCCTTGGAGAAGGCAGTTGTTTTGGAATTTGTCAATTTACT--- 47
|||.|..|..|||| |||
RBAM_023070__ 1 ---------------------------TTGTATATCATCAA---ACTGTC 20
BSNT_03693___ 48 AGCAGTCG--CTATTCTTATTTTGTTAACAGGATTTTTTGTTGCCGTAGA 95
.||..||| |||| |||||||.|||||.|..|.||||||.|||.||||
RBAM_023070__ 21 TGCCATCGTACTAT--TTATTTTATTAACGGCGTGTTTTGTCGCCATAGA 68
BSNT_03693___ 96 ATTTTCAATCGTAAAAGTGCGGCGATCCAAAATTGATCAGCTTGTCGCAA 145
.|||||||||||.||||...||||.|||...|||.|||||||..|.|
RBAM_023070__ 69 GTTTTCAATCGTTAAAGCAAGGCGCTCCCGCATTAATCAGCTCATTG--- 115
BSNT_03693___ 146 AAGGAAAG-----AAAGGTGCTAAAGCGGCAAAGCATGTCATCACTCACC 190
||| ||| |||||.||.|||||.||.|||||||||||.||.||||
RBAM_023070__ 116 -AGG-AAGATGTAAAAGGAGCAAAAGCAGCCAAGCATGTCATTACACACC 163
BSNT_03693___ 191 TTGATGAATATTTATCAGCCTGTCAGCTGGGCATCACAGTCGCAGCCTTA 240
|.||||||||||||||.||.||.||..||||||||||.|||.|.||.||.
RBAM_023070__ 164 TCGATGAATATTTATCGGCATGCCAATTGGGCATCACCGTCACCGCTTTG 213
BSNT_03693___ 241 GGACTGGGATGGCTTGGGGAACCGACTGTGCAAA-CTCTGCTTCGACCGC 289
|||.|.||.|||||.||.||||||||.|| |||| |..||||||..|||.
RBAM_023070__ 214 GGAATCGGCTGGCTGGGTGAACCGACAGT-CAAAGCGATGCTTCAGCCGT 262
BSNT_03693___ 290 T-TTTTCATAAAG-CAGGCTTAAATGAATCGCTTACCCACCTGCTTTCAC 337
| |||| ||||| |.||..|..|.|||.||.||.||||..|.||.|||.
RBAM_023070__ 263 TATTTT--TAAAGACCGGAGTTCACGAAGCGGTTGCCCAAGTCCTGTCAT 310
BSNT_03693___ 338 TCGTCATCGCATTTTTAGC-GGTTACGTATTTAAATGTCGTTATCGGGGA 386
|..|||||||.|||.| || ||||||.|||.|.||||||||||||||.||
RBAM_023070__ 311 TGATCATCGCCTTTCT-GCTGGTTACATATGTGAATGTCGTTATCGGCGA 359
BSNT_03693___ 387 GCTGGCGCCAAAGAGTTTCGCCATTCAAAAAGCAGAAAGCATTAC-CTTG 435
.||.||.||.||.|||||.||.||.||||||||.||..|.||||| |||
RBAM_023070__ 360 ACTTGCCCCGAAAAGTTTTGCTATCCAAAAAGCCGAGCGGATTACACTT- 408
BSNT_03693___ 436 TTGTTCGCTAAACCGCTTATTTGGTTTTATAAGATCATGTTTCCATTCAT 485
||||..||.|.||||.|.||||.||||||||||.|.||||||||.|||||
RBAM_023070__ 409 TTGTCTGCCAGACCGATGATTTTGTTTTATAAGTTAATGTTTCCGTTCAT 458
BSNT_03693___ 486 TTGGCTGTTGAACCACTCTGCCCGATTGATTACAGGAGTGTTTGGGCTGA 535
.||||||.|.||.||.||.|||||..|||||||||...||||.||..|||
RBAM_023070__ 459 CTGGCTGCTCAATCATTCCGCCCGCCTGATTACAGCCATGTTCGGCTTGA 508
BSNT_03693___ 536 AGCCGGCATCAGAGCACGAGCTGGCATATACAGAGGAAGAACTTCGGGTC 585
||||.||.||.||.||.||..||||.|||||.||.||.|||.|.|||||.
RBAM_023070__ 509 AGCCTGCTTCCGAACATGAAATGGCTTATACGGAAGAGGAATTGCGGGTG 558
BSNT_03693___ 586 CTATTGGCTGAAAGCTATAAAAGCGGCGAGATCAGAAAAAGTGAATTAAA 635
||..|.||.|||||||||..|||||||..|||.|.||||||.||..|..|
RBAM_023070__ 559 CTCCTTGCCGAAAGCTATCGAAGCGGCATGATTAAAAAAAGCGAGCTGCA 608
BSNT_03693___ 636 GTACATGAATAATATCTTTACCTTTGATAAACG-AATGGCAAAGGAAATT 684
.|||.|.|||||.||.|||||.||||||||.|| |.||.|||| ||||||
RBAM_023070__ 609 TTACGTAAATAACATTTTTACATTTGATAAGCGCACTGCCAAA-GAAATT 657
BSNT_03693___ 685 ATGGTGCCGCGAAATGAAATGGTCAGTTTGTCACTAGA-TGAAGACTC-- 731
||||||||.||.|||||||||||.|||.||.|..|||| .|..|| ||
RBAM_023070__ 658 ATGGTGCCCCGGAATGAAATGGTGAGTCTGCCGTTAGACAGCGGA-TCGG 706
BSNT_03693___ 732 --CATTTCAAAT-CTTCAGGAAACAGTCAAGCAAACA---AAATATACAC 775
||| || ||.|.|||.|...||| ||||| ||||||||.|
RBAM_023070__ 707 GACAT-----ATGCTCCGGGACATTATCA---AAACAAATAAATATACCC 748
BSNT_03693___ 776 GGTACCCAGTTGT-AAGGGAGGATAAAGATAACGTTATTGGCGTGATTAA 824
||||.||.||.|| ||.||| |||||||||.|.||..|.|||.|.||.||
RBAM_023070__ 749 GGTATCCCGTAGTAAAAGGA-GATAAAGATCATGTAGTCGGCATCATCAA 797
BSNT_03693___ 825 TATGAAAGAAGTGCTGTT----TTCCATGCTGAC-GAAAGA------TTT 863
|||.||||||||..|.|| ||| |||.| |||.|| |||
RBAM_023070__ 798 TATAAAAGAAGTTTTATTCAGATTC----CTGTCAGAAGGAGCGGCGTTT 843
BSNT_03693___ 864 TTCAATCAAGAA-GCATCAAATTGAACCTTTCGTACAGCCCGTTATCCAT 912
...||.||.||| .||.| ||||.|.|.|||||.|..||||||
RBAM_023070__ 844 ACAAAACACGAACTCAGC--------CCTTACATCCAGCCGGCGATCCAT 885
BSNT_03693___ 913 GTCATTGAGACGATTCCTATTTATAAACTACTGCTGAAAATGCAAAAGGA 962
||.||||||||||||||.||||||.||.||.|..|.||||||||...|||
RBAM_023070__ 886 GTGATTGAGACGATTCCGATTTATCAATTATTCGTTAAAATGCAGCGGGA 935
BSNT_03693___ 963 ACGCACTCATATGGCGATCCTCATAGATGAATATGGCGGGACGTCCGGTT 1012
||.|.|.||||||||.||.|||||.|||||.||.|||||.||..|.||.|
RBAM_023070__ 936 ACACGCCCATATGGCCATTCTCATTGATGAGTACGGCGGAACCGCGGGAT 985
BSNT_03693___ 1013 TGGTCACTGTCGAGGATATTATCGAAGAAATTGTAGGAGAAATCCGTGAT 1062
|.||.||.|..||.||.||.||.|||||.||.||.||.||||||||.||.
RBAM_023070__ 986 TAGTAACGGCGGAAGACATCATTGAAGAGATCGTCGGCGAAATCCGCGAC 1035
BSNT_03693___ 1063 GAATTTGATGCGGATGAAGTGCCTCATATCCG--CGAA--CTTGGAAAGG 1108
|||||||||.||||||||...||| |||| |.|| |||||.|||.
RBAM_023070__ 1036 GAATTTGATACGGATGAAACACCT----TCCGTTCAAAAGCTTGGGAAGA 1081
BSNT_03693___ 1109 ATCATTACTTGTTAAATGCAAAATTATTAATCAGCGATGTTAACAGCCTG 1158
|.|..||..|..|.||.||.|||||..|.||||||||.||.|| ||
RBAM_023070__ 1082 ACCGCTATCTCCTGAACGCCAAATTGCTGATCAGCGACGTCAA-----TG 1126
BSNT_03693___ 1159 -----CTTGGAACCGA-TTTATCAGAGGCTG---AAGTAGACAC-CTTGG 1198
||.|||||.|| .||| .||||| ||||.||.|| ||.||
RBAM_023070__ 1127 ATGTACTCGGAACAGAGATTA----CGGCTGATCAAGTCGATACACTCGG 1172
BSNT_03693___ 1199 GCGGCTGGTTTTTGACACAAAACATAGATGCTGAGCCTGAAAGTACCATA 1248
| |||||||||.|.||.||..|.||.||.||..||||.|..||.|||||.
RBAM_023070__ 1173 G-GGCTGGTTTCTTACTCAGCATATTGACGCGAAGCCCGGGAGCACCATT 1221
BSNT_03693___ 1249 GAATATGATGGCTACTCTTTTAAGGTAAAAGACATCAACAGCCATCACAT 1298
||.|.|||.||||||.|.||||.|||||||||.|||.|||||||| |||
RBAM_023070__ 1222 GATTTTGAAGGCTACACATTTACGGTAAAAGAAATCGACAGCCAT--CAT 1269
BSNT_03693___ 1299 TTTATT--TATAGAAGTTAAAAAAGCTGAATAG 1329
.|.||| .||.||||.|.||||||||||||||
RBAM_023070__ 1270 ATCATTACGATTGAAGCTGAAAAAGCTGAATAG 1302
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.