Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03692 and RBAM_023060

See DNA alignment / Visit BSNT_03692 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:58
# Commandline: needle
#    -asequence pep-align/BSNT_03692___yqxL.1.9828.seq
#    -bsequence pep-align/RBAM_023060___yqxL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03692___yqxL-RBAM_023060___yqxL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03692___yqxL-RBAM_023060___yqxL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03692___yqxL
# 2: RBAM_023060___yqxL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 319
# Identity:     212/319 (66.5%)
# Similarity:   264/319 (82.8%)
# Gaps:           5/319 ( 1.6%)
# Score: 1201.5
# 
#
#=======================================

BSNT_03692___      1 MKAHTGKDWFWYQMGPQERSKARDLIHFSHWPQCEKWFENNHHVNFLRVD     50
                     ||.|:|.||.|||:||.|:::|:.:||.:||||||||||:.:|:||||.|
RBAM_023060__      1 MKVHSGADWLWYQLGPHEKTEAKKMIHHNHWPQCEKWFEHENHINFLRSD     50

BSNT_03692___     51 TTETENEAVFGSIVYDQGLGEEKDHTVFHFYITRQYFFTINFDFSILREI    100
                     |.:..|||||||::|.|||.:||:||||||||||.:|||||||||:||.:
RBAM_023060__     51 TNDQNNEAVFGSLIYHQGLDDEKNHTVFHFYITRDFFFTINFDFSLLRGV    100

BSNT_03692___    101 KGKEVVRQMERADNAIEGFLILLGELMNAYLIGVDEFEVKLRKLRWQIKD    150
                     |.|...:|::..:|.||||.:|||||||:||||:||||||.|.|:|||.|
RBAM_023060__    101 KEKHATQQIQTCENPIEGFFVLLGELMNSYLIGLDEFEVKQRTLKWQIHD    150

BSNT_03692___    151 DNSKSILNRVHLLRHELMIWKNLILSAKKIEMALKETFLPQNEGKKDYQR    200
                     ||||.||..||.|||||.|||.|.|.|||:||||||.|||:|:.:|||.|
RBAM_023060__    151 DNSKGILENVHKLRHELFIWKGLTLGAKKVEMALKEAFLPKNDRQKDYLR    200

BSNT_03692___    201 TQLKIDRGFSYISEFEGELNNLLHSEEVITSHRGNEIVKALTIFTTLFTP    250
                     ...|::||.:||:||:.||:||||:||||||.||||||||||||||||||
RBAM_023060__    201 AHQKMERGITYINEFDQELSNLLHAEEVITSQRGNEIVKALTIFTTLFTP    250

BSNT_03692___    251 ITALGALWGMNFSVMPELNWKYGYLFSLLLIVTSTVLIYLYLRKKGWTGD    300
                     :|||||||||||..||||:|||.|:.|::||:.||:|||:|||:||||||
RBAM_023060__    251 MTALGALWGMNFDNMPELHWKYAYICSIVLIIVSTLLIYIYLRQKGWTGD    300

BSNT_03692___    301 MLQERKKK--KKPRKRRTL    317
                     :|:|.:||  :|.:||   
RBAM_023060__    301 ILREHQKKYLRKEKKR---    316


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.