Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03683 and RBAM_023030

See DNA alignment / Visit BSNT_03683 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:58
# Commandline: needle
#    -asequence pep-align/BSNT_03683___comGC.1.9828.seq
#    -bsequence pep-align/RBAM_023030___comGC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03683___comGC-RBAM_023030___comGC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03683___comGC-RBAM_023030___comGC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03683___comGC
# 2: RBAM_023030___comGC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 102
# Identity:      74/102 (72.5%)
# Similarity:    88/102 (86.3%)
# Gaps:           4/102 ( 3.9%)
# Score: 403.0
# 
#
#=======================================

BSNT_03683___      1 ----MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQN     46
                         .|:.||||:||||||||:||||||||||||||||:||.||||||||
RBAM_023030__      1 MLRLKNQDGFTLIEMLIVLFIVSILLLITIPNVTKHNQSIQHKGCEGLQN     50

BSNT_03683___     47 MVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAVCPNGKRIIITGGEVKV     96
                     |||||:||:|:||||:.|.:.|||||||:||:..|||||:|:|:||||.|
RBAM_023030__     51 MVKAQVTAYEIDHEGKMPDMNDLQSEGYIKKNTACPNGKQILISGGEVTV    100

BSNT_03683___     97 EH     98
                     |.
RBAM_023030__    101 EQ    102


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