Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03682 and RBAM_023020

See DNA alignment / Visit BSNT_03682 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:58
# Commandline: needle
#    -asequence pep-align/BSNT_03682___comGD.1.9828.seq
#    -bsequence pep-align/RBAM_023020___comGD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03682___comGD-RBAM_023020___comGD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03682___comGD-RBAM_023020___comGD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03682___comGD
# 2: RBAM_023020___comGD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 146
# Identity:      83/146 (56.8%)
# Similarity:   104/146 (71.2%)
# Gaps:           4/146 ( 2.7%)
# Score: 387.5
# 
#
#=======================================

BSNT_03682___      1 MNIKLNEEKGFTLLESLLVLSLASILLIAVFTTLPPAYDNTAVRQAARQL     50
                     ||.....|.||||||||:||||||:||..:|||:||||.:.||||...||
RBAM_023020__      1 MNNNRRTENGFTLLESLIVLSLASVLLTVLFTTVPPAYTHLAVRQKTEQL     50

BSNT_03682___     51 KNDIMLTQQTAISRQQRTKILFHKKE--YQLVIGDTVIERPYATGLSIEL     98
                     :.||.|.|:|||:..:||||.|..||  |:|..|..::||.: ..|.|.|
RBAM_023020__     51 QKDIQLAQETAIAEHKRTKITFLPKEHKYKLQSGGRIVERSF-DSLHITL     99

BSNT_03682___     99 LTLKDRLEFNEKGHPNAGGKIRVKGHA-VYDITVYLGSGRVNVERK    143
                     :||.:.||||||||||:||||::|... .|:||||||||.|:.:||
RBAM_023020__    100 VTLPESLEFNEKGHPNSGGKIQLKSAGFTYEITVYLGSGNVHAKRK    145


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