Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03680 and RBAM_023000
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:58
# Commandline: needle
# -asequence pep-align/BSNT_03680___comGF.1.9828.seq
# -bsequence pep-align/RBAM_023000___comGF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03680___comGF-RBAM_023000___comGF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03680___comGF-RBAM_023000___comGF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03680___comGF
# 2: RBAM_023000___comGF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 166
# Identity: 60/166 (36.1%)
# Similarity: 88/166 (53.0%)
# Gaps: 39/166 (23.5%)
# Score: 329.0
#
#
#=======================================
BSNT_03680___ 1 ---------------------------------------MLISGSLAAIF 11
:.:||:|..|.
RBAM_023000__ 1 MVSITKCVRLTAAKKKCASAFSKQTGFTLLNVLFSLAVCLFLSGTLGPIL 50
BSNT_03680___ 12 HLFLSRQQEHDGFTQQEWMISIEQMMNECKESQAVKTAEHGSVLICTNLS 61
|||||.:.::.|...:|..|:::|:|||||:::|||.|:.|..|.|....
RBAM_023000__ 51 HLFLSNRADNGGLDSREHQIAVQQIMNECKQAEAVKPADGGRALACRKTG 100
BSNT_03680___ 62 GQDIRFEIYHSMIRKRVDGKGHVPILDHITAMKADIENGVVLLKIESEDQ 111
|:::||||||.||||||:||||||||.:..::.||::||::||:|.|...
RBAM_023000__ 101 GEEVRFEIYHKMIRKRVNGKGHVPILQNAASLTADVKNGLLLLEISSVTG 150
BSNT_03680___ 112 KVYQTAFPVYSYLGGG 127
:..|...||||...|.
RBAM_023000__ 151 QKNQAVIPVYSSFKGD 166
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